Table 1 General features of Taenia solium cysticerci cDNA sequences.
From: Transcriptome analysis of Taenia solium cysticerci using Open Reading Frame ESTs (ORESTES)
Total number of valid ORESTES* | 1,180 |
|---|---|
Total number of non-redundant sequences | 812 |
Average length of non-redundant sequences | 355 bp |
Clusters | 185 |
Singlets | 627 |
Non-redundant sequences G+C average content | 49% |
Number of non-redundant sequences hits on/with: | |
- Blast | 424 (52.1%) |
- RPSBlast | 150 (18.4%) |
- InteProScan | 74 (9.0%) |
- HMMER | 97 (12.0%) |
- T. solium Genome ESTs | 107 (13.2%) |
Sequences with no hits (blast/Interpro/HMMER) | 350 (43.0%) |
Number of manually validated CDS | 191 (23.5%) |
CDS G+C content average | 53% |
Number of annotated sequences | 191 (23.5%) |