Locus name | Primer sequences (tails removed) | Repeat unit | Length of locus in Sj Genome draft (excl tails) | Length range (PCR product - bp excl tail) | No. of alleles | In HWE? | Ho | He |
---|---|---|---|---|---|---|---|---|
SjP4 | F:ACAAGCTCCAATCGTCTCTGA R:GAATACTGCCGCCCTTGTAA | TAA | 217 | 182-244 | 14 | Â | 0.789 | 0.831 |
SjP9 | F:GATGAAACAGATACCCAGCAC R:TGCATGTAAAAATGGCTTGC | TAA | 283 | 239-301 | 14 | ** | 0.600 | 0.915 |
SjP18 | F:TCCTTTATCTGGGCTGTGGA R:TTTCAGCAGGATAACATGACG | TGA | 286 | 261-298 | 7 | Â | 0.684 | 0.703 |
SjP19 | F:GGTATCTTCGCTTTTTAGCATGG R:TCCTAGGGTGTGGTATCAGAG | ATT | 196 | 161-257 | 12 | ** | 0.737 | 0.896 |
SjP22 | F:CAAAGCCTAAACGTCATAGACAG R:CAACCACCGATAAGTAGAGTGGA | TTA | 150 | 105-167 | 11 | * | 0.850 | 0.892 |
SjP23 | F:GTACGATATGAGGGAAAGTTCA R:CTCTCCTTCAGACGAATTGAG | TAA | 219 | 192-253 | 14 | Â | 1.00 | 0.933 |
SjP26 | F:CAAGGGAACATTGTACATGAAG R:TGGTAAAGGAGAAAGTGAACG | TAA | 307 | 229-312 | 7 | Â | 0.700 | 0.659 |
SjP28 | F:TAACGCCTTTTCCCACATTC R:ATAACCACGATGGGAACCAA | TTA | 242 | 232-269 | 13 | ** | 0.900 | 0.926 |
SjP32 | F:TGTCACCGAGTCTTCATTAGC R:ACAGTCAGTAGACCTGGATAAAC | TTA | 175 | 142-192 | 14 | Â | 0.950 | 0.929 |
SjP34 | F:GGCGACCATACATAAGGAGAAT R:GACCGATTTCTAATGGAGCA | TAA | 409 | 381-430 | 13 | * | 0.778 | 0.908 |
SjP37 | F:TCCTTGACACGAGGTACATGT R:ATTACGTAACAGAAGGCTGGA | TAT | 290 | 240-314 | 8 | Â | 0.833 | 0.714 |
SjP39 | F:GACGACTGTTAAGTCCATCTGA R:ATAACCAATCTCCACGAAAGC | ATT | 239 | 223-251 | 8 | Â | 0.900 | 0.871 |
SjP42 | F:GCTGCAGCTTCTGTGTAGTAA R:GTCTTGCTCAGATCAGTTCGT | TAA | 216 | 199-234 | 9 | Â | 0.950 | 0.855 |
SjP43 | F:ACAATGGCTATTGGTTGAGTAG R:GGAGCATGCGTATATGGAAAA | TAA | 188 | 184-235 | 9 | Â | 0.750 | 0.854 |
SjP45 | F:ATAACACCGAATCTGTTCAGC R:TAATCCGGTCAGGATGTATGT | TAT | 156 | 150-244 | 13 | Â | 0.850 | 0.921 |
SjP48 | F:TTGTTGGGTAGTGATGGTAGG R:TAGTTCATTCCACCTCTTGGA | TAA | 246 | 251-273 | 6 | Â | 0.650 | 0.795 |
SjP54 | F:TTAGGCTTGTTGGTGCTGATA R:AGGTAAAGCAAATCCCATAGC | GGTA | 437 | 373-446 | 9 | Â | 1.00 | 0.712 |
SjP58 | F:TCCCAGTACCAATGTAGATGTG R:CTAATAAAGTCGTCAAGGAGCA | AAT | 227 | 439-499 | 12 | ** | 0.800 | 0.921 |
SjP60 | F:CGATTCATTCATAGCCTGACT R:GAATCCCATCACAGATTAACG | TAT | 155 | 134-165 | 10 | Â | 0.900 | 0.867 |
SjP61 | F:TCATCTTGTCACCAACTAGGC R:GCTTGGAGGAGGCTAAAATAC | TAT | 188 | 158-238 | 9 | Â | 0.700 | 0.679 |
SjP63 | F:ACCGCCACTACCACTAACCTCA R:TTGACCTGAAATCTGTCCCTA | TAA | 390 | 333-389 | 13 | ** | 0.800 | 0.904 |
SjP88 | F:GCTTTCCAGGCATAAACTTCAC R:TCTCCTAATGATGGGAACAG | TAA | 408 | 380-417 | 9 | Â | 0.950 | 0.887 |