Table 4 Population genetics of the ten sampled farms and three sub-datasets
From: Population genetic structure of Ascaridia galli re-emerging in non-caged laying hens
Characteristic | Jönköping farm | Denmark farm | All farms |
|---|---|---|---|
Number of worms | 56 | 18 | 99 |
Number of hosts | 6 | 9 | 10 |
Total number of peaks | 68 | 69 | 97 |
Numnber of variable peaks | 46 | 50 | 79 |
Total diversity (Ht) | 0.1977 | 0.2675 | 0.145 |
Average sample diversity (Hs) | 0.1961 | 0.2607 | 0.127 |
Population structure (Fst) | 0.0081 | 0.0254 | 0.128 |
Fst – Sweden only | — | — | 0.136 |
Fst – Non-broilers | — | — | 0.124 |
Fst – Swedish non-broilers | — | — | 0.133 |
Mutation rate (4Nμ) | — | — | 0.109 |
Migration rate (Nm) | — | — | 1.70 |
Nm – Sweden only | — | — | 1.59 |
Re-allocation success (%) | 30.4 | — | 86.9 |
Test of neutrality (% loci neutral) | 76.1 | 74.0 | 74.7 |
Geographic correlation | — | — | 0.023 * |