Code | Amino acid sequence of 18 Lys and the 18 Lys fused epitopes synthesized for PDDV formulations | Oligonucleotide sequences used for plasmid construction | Source | Epitope type |
---|---|---|---|---|
18K | KKKKKKKKKKKKKKKKKK | None | None | None |
C1 | KKKKKKKKKKKKKKKKKKNLMKENKNL | 5'-tcgacatgaatcttatgaaagaaaataagaatttag-3' | Sj 97 (555-563) | CTL |
 |  | 5'-aattctaaattcttattttctttcataagattcatg-3' |  |  |
C2 | KKKKKKKKKKKKKKKKKKVRAVANDLK | 5'-tcgacatggtaagagcggtggcaaatgacttaaaag-3' | Sj 22.6 (134-142) | CTL |
 |  | 5'-aattcttttaagtcatttgccaccgctcttaccatg-3' |  |  |
C3 | KKKKKKKKKKKKKKKKKKATRLNNEVL | 5'-tcgacatggcaactagattgaataatgaagttttgg-3' | Sj 97 (672-680) | CTL |
 |  | 5'-aattccaaaacttcattattcaatctagttgccatg-3' |  |  |
T2 | KKKKKKKKKKKKKKKKKKITELEDVAERERLKA | 5'-tcgacatgatcactgaacttgaagatgttgcagagagagaacgattaaaagcgg-3' | Sj 97 (313-327) | Th-cell |
 |  | 5'-aattccgcttttaatcgttctctctctgcaacatcttcaagttcagtgatcatg-3' |  |  |
T3 | KKKKKKKKKKKKKKKKKKAKQYNICCKFKELLD | 5'-tcgacatggctaagcaatataacatatgttgtaaatttaaagaacttctcgatg-3' | Sj22.6 (111-125) | Th-cell |
 |  | 5'-aattcatcgagaagttctttaaatttacaacatatgttatattgcttagccatg-3' |  |  |
B1 | KKKKKKKKKKKKKKKKKKEQRLRERDEELESLRKSTTRTI | 5'-tcgacatggaacagagacttagagaaagagatgaagaattagaaagtctaagaaagagtacaactagaacaatattg-3' | Sj 97 (489-510) | B-cell |
 |  | 5'-aattcaatattgttctagttgtcatctttcttagactttctaattcttcatctctttctctaagtctctgttccatg-3' |  |  |
B2 | KKKKKKKKKKKKKKKKKKWEVRREKEELKKDKEGKVSTL | 5'-tcgacatgtgggaagtccgtcgtgaaaaggaagaattaaagaaagacaaggaaggcaaagtatccacacttg-3' | Sj 22.6 (77-97) | B-cell |
 |  | 5'-aattcaagtgtggatactttgccttccttgtctttctttaattcttccttttcacgacggacttcccacatg-3' |  |  |
B3 | KKKKKKKKKKKKKKKKKKRQEEEMKKAAEELAKLKEEFEK | 5'-tcgacatgcgtcaggaagaagaaatgaagaaagcagccgaagaattagctaaactaaaagaagaatttgaaaaag-3' | Sj 62 (167-188) | B-cell |
 |  | 5'-aattctttttcaaattcttcttttagtttagctaattcttcggctgctttcttcatttcttcttcctgacgcatg-3' |  |  |