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Table 2 The detection of putative recombination events using six different tests

From: Multi-locus sequence typing of Ehrlichia ruminantium strains from geographically diverse origins and collected in Amblyomma variegatum from Uganda

Event

Breakpoint

Recombinant

Major parent

Minor parent

Detection method

 

Beginning

Ending

   

GeneConv

Bootscan

MaxChi

Chimaera

SiScan

3Seq

1

2965

3419

Kerr Seringea

Senegal

Strain 331

Strain 469

Unknown

Ifé Nigeria

+

+

+

+

+

+

2

388

1284

Strain 1062

S001

Kerr Seringe

+

+

+

+

+

+

3

1

2651

Kerr Seringe

Senegal

Strain 331

Strain 469

Strain 630

Unknown

+

   

+

+

4

2652

3419

Strain 623

A004b

Unknown

  

+

 

+

+

  1. aA representative ST of Kerr Seringe and Sankat 430.
  2. bA representative ST of A004, A006, and T009.
  3. +, detection of significant recombination (p < 0.05).