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Table 1 PCR primers used for the nested amplification of X-cell SSU rDNA.

From: Molecular identification and transmission studies of X-cell parasites from Atlantic cod Gadus morhua (Gadiformes: Gadidae) and the northern black flounder Pseudopleuronectes obscurus (Pleuronectiformes: Pleuronectidae)

nested

primer pairs

fwd primer (5'-3')

rev primer (5'-3')

annealing temp °C

size

(bp)

cod

    

i) 305fs/H-R3Mx

tgacctatcatgctgtgatgg

taggaattcctcgttcaagacg

54

1350

ii) 390Xfx/1400rs

agagggagcctgagagacg

agcaagcccgtatggagaagacg

52

1000

flounder

    

i) 280fs/H-R3Mx

atccatcagccatcgacgc

taggaattcctcgttcaagacg

55

1290

ii) 390Xfx/1000rs

agagggagcctgagagacg

tcgtccgatcctcagtcgg

55

645

  1. s X-cell species-specific primer
  2. x X-cell universal primer