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Table 2 Location of the An. nili microsatellite markers on polytene chromosomes.

From: Improving the population genetics toolbox for the study of the African malaria vector Anopheles nili: microsatellite mapping to chromosomes

 

Locus

Accession number a (with length)

Location on the An. nili map

Location on the An. gambiae map

Best e-value for BLASTN

1.

A14

AJ536274 (467 bp)

X: 2A

X: 3D

3e-08

2.

1G13

AJ536271 (441 bp)

X: 3A

-

-

3.

1A27

AJ536268 (300 bp)

2R: 15C

-

-

4.

2C157

AJ536273 (404 bp) JF742788 (2,967 bp)

2R: 17AB

2R: 10A

7e-04

5.

1F43

AJ536270 (462 bp)

2R: 18A

-

-

6.

F41

AJ536277 (423 bp)

2R: unknown b

2R: 16D

2e-27

7.

2Ateta

AJ536272 (479 bp)

2L: 20C

3L: 45A

3e-17

8.

F56

AJ536278 (474 bp)

3R: 31C

-

-

9.

A154

JF742789 (1,522 bp)

3R: unknown b

3R: 30E

6e-43

10.

B115

AJ536276 (350 bp) JF742787 (10,057 bp)

3L: 38B

2L: 20D

3e-24

11.

1D80

AJ536269 (483 bp)

3L: 44A

-

-

  1. a AJ refers to clone sequences; JF refers to assembled sequences.
  2. b Arms determined based on the chromosome homology established earlier [19].
  3. "-" no homologous sequence found in the An. gambiae genome using BLASTN.