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Table 2 Primers and probes used for real-time detection of TBEV*

From: Prevalence of tick borne encephalitis virus in tick nymphs in relation to climatic factors on the southern coast of Norway

Primer name

Sequence (5’ → 3’)

Genom position

GenBank accession No.

TBE 320F

GGGAGCGCAAAACTGGAA

1662–1680

U27495

TBE 373R

TGAGGAGCCCCAAATTCAAC

1696–1715

U27495

TBE 339 probe

(FAM)-AACGCAGAAAGAC-(BHQ1)

1681–1693

U27495

  1. *Designed by T. Tengs at the Norwegian veterinary institute.