From: Molecular epidemiological studies on animal trypanosomiases in Ghana
Organism | Target gene | Primer | Sequence (5' to 3') | Amplicon size (bp) | Annealing temperature (°C) | Reference |
---|---|---|---|---|---|---|
Trypanosoma spp. | ITS1 rDNA | ITS1 CF | CCGGAAGTTCACCGATATTG | Variable | 58 | [8] |
ITS1 BR | TTGCTGCGTTCTTCAACGAA | |||||
T. congolense Kilifi | Satellite DNA monomer | TCK 1 | GTG CCC AAA TTT GAA GTG AT | 294 | 55 | [15] |
TCK 2 | ACT CAA AAT CGT GCA CCT CG | |||||
T. congolense Forest | Satellite DNA monomer | TCF 1 | GGA CAC GCC AGA AGG TAC TT | 350 | 55 | [15] |
TCF 2 | GTT CTC GCA CCA AAT CCA AC | |||||
T. congolense Savannah | Satellite DNA monomer | TCS 1 | CGA GAA CGG GCA CTT TGC GA | 316 | 55 | [15] |
TCS 2 | GGA CAA AGA AAT CCC GCA CA | |||||
T. vivax | Cathepsin L-like gene | DTO 155 | TTAAAGCTTCCACGAGTTCTTGATGATCCAGTA | 177 | 65 | [14] |
TviCatL1 | GCCATCGCCAAGTACCTCGCCGA | |||||
T. evansi | RoTat1.2 VSG gene | TeRoTat 920 F | CTGAAG AGGTTGGAAATGGAGAAG | 151 | 58 | [16] |
TeRoTat 1070R | GTTTCGGTGGTTCTGTTGTTG TTA | |||||
T. b. rhodesiense | SRA gene | Forward | ATAGTGACAAGATGCGTACTCAACGC | 284 | 68 | [17] |
Reverse | AATGTGTTCGAGTACTTCGGTCACGCT | |||||
T. b. gambiense | TgsGP gene | sense | GCTGCTGTGTTCGGAGAGC | 308 | 63 | [18] |
 |  | anti-sense | GCCATCGTGCTTGCCGCTC |  |  |  |