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Table 2 Repeat motif, primers sequence, and annealing temperature used for PCR amplification of the microsatellite loci in Phlebotomus papatasi collected from different populations in Sudan and Egypt

From: Evidence for genetic differentiation at the microgeographic scale in Phlebotomus papatasi populations from Sudan

Locus

Motif

Fluorescent labeled primer sequence†

Annealing T°

*Pap1

(GTT)

FAM-CGGTCACTTCCCTCTTCTCA

58°C

  

R: CCCCTTCTACAACCACTTCAA

 

*Pap2

(CA)

JOE-CACTCGCAAGATGGTAGGGTA

58°C

  

R: CGGCGCCTATAGACAGAGAA

 

*Pap4

(GAA)

FAM-GTGGCAAAATTGGTTTGGT

55°C

  

R: ACCTTTTGCATATGCCCATC

 

♦ AA13

(GAG)

TAMRA-CTCCAACTCCTCATCCACCTC

59/55°C

  

R: GGCGACGAATGGGACAAAG

 

♦ AA18

(AGC)

JOE-5’-GCTGCACAGCCGCCTGATG

55°C

  

R: ATCAGCAGACACTCCAGCAACACC

 

♦ AA24

(GCA)

TAMRA-5’-CTATTCCCGCCCCACTTGG

55°C

  

R: TCAATCGACATTCGGACAGGC

 

♦ AA82

(GGA)

JOE-TCAACCAAGGTAGTCTCATCAG

49°C

  

R: GAGGACTTCCGATTTCTGTAG

 
  1. † Fluorescent marker dyes used in this study are indicated in bold.
  2. *Designed by Hamarsheh et al. (2006) for P. papatasi.
  3. ♦Designed by Aransay (2001) for P. perniciosus.