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Table 2 Bacterial and fungal DNA used for the setting up of the 2qPCR assay

From: Duplex quantitative real-time PCR assay for the detection and discrimination of the eggs of Toxocara canis and Toxocara cati (Nematoda, Ascaridoidea) in soil and fecal samples

Species

Strain and isolate references

Bacillus anthracis

CEB 9434

Bacillus cereus

DSM 345

Enterococcus casseliflavus

DSM 10255

Staphylococcus aureus

ATCC 35884

Streptococcus oralis

DSM 20627

Streptococcus pneumoniae

ATCC 6314-D

Streptococcus pyogenes

ATCC 12344-D

Acinetobacter calcoaceticus

DSM 30006

Citrobacter freundii

DSM 30039

Escherichia coli

R453

Escherichia coli

R456

Escherichia coli

R457

Haemophilus influenzae

DSM 4690

Klebsiella oxytoca

ATCC 700324-D

Klebsiella pneumoniae

ATCC 700721-D

Legionella pneumophila

DSM 7513

Moraxella catarrhalis

DSM 9143

Neisseria gonorrhoeae

ATCC 53420-D

Neisseria meningitidis

DSM 10036

Providencia stuartii

DSM 4539

Pseudomonas aeruginosa

DSM 50063

Pseudomonas fluorescens

DSM 50090

Pseudomonas syringae

DSM 1241

Serratia marcescens

DSM 30121

Stenotrophomonas maltophilia

DSM 8573

Alternaria alternata

CTMA 07-022

Aspergillus fumigatus

CTMA 07-035

Botrytis cinerea

CTMA BC/07/31

Cladosporium cladosporoides

CTMA 07-019

Cladosporium herbarum

CTMA CH/07/41

Epicoccum nigrum

CTMA 07-086

Pleospora herbarum

CTMA 07-077

Trichophyton rubrum

CTMA MYC001

  1. ATCC: American Type Culture Collection.
  2. CEB: Centre d’Etude du Bouchet, Vert le Petit, France.
  3. DSM: Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH.
  4. CTMA: Center for Applied Molecular Technologies, private DNA sample collection.