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Table 1 NCBI accession numbers (number.version) of GDP-L-fucose synthesis-associated genes referenced in this study

From: In silico analysis of the fucosylation-associated genome of the human blood fluke Schistosoma mansoni: cloning and characterization of the enzymes involved in GDP-L-fucose synthesis and Golgi import

Source organism Gene identifier a Nt accession Prot. accession Function b References
Homo sapiens GMDS NM_001500.2 NP_001491.1 GMD [3639]
  TSTA3/FX NM_003313.3 NP_003304.1 GMER [20, 37, 40, 41]
  FUK NM_145059.2 NP_659496.2 FUK [14]
  FPGT/GFPP NM_003838.3 NP_003829.2 FPGT [13, 42, 43]
Mus musculus Gmds NM_146041.2 NP_666153.1 GMD [22]
  Tsta3 NM_031201.1 NP_112478.1 GMER [22, 44, 45]
  Fuk NM_172283.2 NP_758487.2 FUK [15]
  Fpgt NM_029330.2 NP_083606.2 FPGT " "
Danio rerio gmds NM_200489.2 NP_956783.2 GMD [46, 47]
Drosophila melanogaster Gmd NM_135044.3 NP_608888.2 GMD [11, 18]
  Gmer NM_137890.2 NP_611734.1 GMER " "
Caenorhabditis elegans gmd-1 AM231683.1 CAJ77752.1 GMD [11]
  gmd-2 NM_060705.1 NP_493106.1 " " " "
  ger-1 NM_066139.3 NP_498540.1 GMER " "
Schistosoma mansoni GMD GU574757.1 ADO17520.1 GMD Present study
  GMER GU574758.1 ADO17521.1 GMER " "
Mortierella alpina GMD GU299800.1 ADC54120.1 GMD [48]
  GMER GU299801.1 ADC54121.1 GMER " "
Arabidopsis thaliana GMD1 NM_126026.3 NP_201429.1 GMD [11, 49]
  MUR1/GMD2 NM_114976.3 NP_190685.2 " " [11, 49, 50]
  GER1 NM_105984.3 NP_177468.2 GMER [11, 51, 52]
  GER2 NM_101652.2 NP_564040.1 " " [11]
  FKGP NM_100004.3 NP_563620.1 FUK/FPGT (dual) [17]
Bacteroides fragilis Gmd CR626927.1 CAH07586.1 GMD [16]
  Fcl CR626927.1 CAH07585.1 GMER " "
  Fkp NC_003228.3 YP_212230.1 FUK/FPGT (dual) [16, 53]
  1. a Official gene names/identifiers are provided. Genes in boldface type were used as query sequences to search for homologs in the SchistoDB [35].
  2. b GMD, GDP-D-mannose-4,6-dehydratase; GMER, GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; FUK, L-fucose kinase; FPGT, fucose-1-phosphate guanylyltransferase; FUK/FPGT, bifunctional L-fucose kinase/fucose-1-phosphate guanylyltransferase.