Primer name | Genera or Species | Target gene | Nucleotide sequence (5′-3′) | Annealing temperature (°C) | Approx product size (bp) | Reference |
---|---|---|---|---|---|---|
CLS F | Coxiella | 16S rRNA | CACGTAGGAATCTACCTTGTAG | 55 | 90 | 55 |
CLS R | Â | Â | CGTTTTGTTCCGAAGAAATTAT | Â | Â | Â |
ALS 82Â F | Arsenophonu | 16S rRNA | AGGGAGCTTGCTTCCTGGCCGG | 59 | 130 | 55 |
ALS 198R | Â | Â | CGAAGGTGTGAGGCCTAATGG | Â | Â | Â |
Rickettsia 354Â F | Rickettsia | 16S rRNA | CAGCAATACCGAGTGAGTGATGAAG | 56 | 350 | 69 |
Rickettsia 647R | Â | Â | AGCGTCAGTTGTAGCCCAGATG | Â | Â | Â |
NCLS F | NCLS | 16S rRNA | TCCCTGGCGGCGAGTGG | 55 | 110 | This study |
NCLS R | Â | Â | CGTATTAGAGATTAGAGAAACC | Â | Â | Â |
Rr 190.70p | Rickettsia | rompA | ATGGCGAATATTTCTCCAAAA | 48 | 540 | 57 |
Rr 190.602n | Â | Â | GTTCCGTTAATGGCAGCATCT | Â | Â | Â |