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Table 2 Nucleotide diversity and sequence variation in repeats

From: Functional constraints and evolutionary dynamics of the repeats in the rDNA internal transcribed spacer 2 of members of the Anopheles barbirostris group

Repeats type Repeats N° of SS π N° sites compared* Sequence lengths
Clade I type 1 A, C, E, G 2 0.01 112 112
Clade I type 2 D, B, F, H 5 0.02 108 108
An. campestris type 1 A, C, E, G 4 0.02273 110 110 (G), 111 (A,C,E)
An. campestris type 2 D, B, F 9 0.05 112 112 (F), 113 (D,B)
An. vanderwulpi type 1 A, E, H 11 0.08 103 103 (E), 108 (H), 117 (A)
An. vanderwulpi type 2 C, D, G 6 0.04 102 102 (D), 105 (G), 107 (C)
An. vanderwulpi type 3 B, F, I 6 0.04 98 99 (B,F), 110 (I)
Clade III type 1 A, E, H 17 0.11 107 107 (E), 113 (H), 116 (A)
Clade III type 2 C, D, G 7 0.05 101 103 (D,G), 105 (C)
Clade III type 3 B, F, I 7 0.05 98 99 (B), 101 (F), 113 (I)
Clade IV type 1 A, D, F 5 0.04 93 97 (F), 98 (D), 116 (A)
Clade IV type 2 E, G 16 0.14 114 114 (E), 119 (G)
  1. SS: segregating sites.
  2. *excluding sites with gaps/missing data.