From: Advantage of using colonic washouts for Blastocystis detection in colorectal cancer patients
Subtypes | STS primer sets | Product size (bp) | Sequences of forward ( F) and reverse ( R) primers (5′-3′) | Source of primer | GenBank accession no. | Reference | Clade in the SSU rRNA phylogenya |
---|---|---|---|---|---|---|---|
1 | SB83 | 351 | F GAAGGACTCTCTGACGATGA | Nand II | AF166086 | Yoshikawa et al. [6] | I |
R GTCCAAATGAAAGGCAGC | |||||||
2 | SB155 | 650 | F ATCAGCCTACAATCTCCTC | B | AF166087 | VII | |
R ATCGCCACTTCTCCAAT | |||||||
3 | SB227 | 526 | F TAGGATTTGGTGTTTGGAGA R | HV93–13 | AF166088 | Yoshikawa et al. [7] | III |
TTAGAAGTGAAGGAGATGGAAG | |||||||
4 | SB332 | 338 | F GCATCCAGACTACTATCAACATT | HJ96AS-1 | AF166091 | VI | |
R CCATTTTCAGACAACCACTTA | |||||||
5 | SB340 | 704 | F TGTTCTTGTGTCTTCTCAGCTC | HJ96–1 | AY048752 | Yoshikawa et al. [18] | II |
R TTCTTTCACACTCCCGTCAT | |||||||
6 | SB336 | 317 | F GTGGGTAGAGGAAGGAAAACA | SY94–3 | AY048751 | V | |
R AGAACAAGTCGATGAAGTGAGAT | |||||||
7 | SB337 | 487 | F GTCTTTCCCTGTCTATTCTGCA | RN94–9 | AY048750 | IV | |
R AATTCGGTCTGCTTCTTCTG |