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Table 4 Significantly differentially transcribed A. marginale genes when comparing ISE6 v. blood with GSEA

From: Global transcriptional analysis reveals surface remodeling of Anaplasma marginale in the tick vector

Category Description Test statistic Lower taila Upper taila
19867 Outer membrane -675.412 0b 1
30255 Protein secretion by the type IV secretion system (PMID:11895979 [TAS]) -423.133 0b 1
9405 Pathogenesis (GO_REF:0000011 [ISS] TIGR_TIGRFAMS:TIGR02800) -131.569 0.0046 0.9954
6289 Nucleotide-excision repair (PMID:16482227 [ISS] TIGR_TIGRFAMS:TIGR00630) -86.7752 0.0155 0.9845
8152 Metabolic process (PMID:16482227 [ISS] UniProtKB:P28304) -49.7659 0.0208 0.9792
9253 Peptidoglycan catabolic process (PMID:10952301 [ISS]) -38.009 0.0273 0.9727
6810 Transport (PMID:12704232 [ISS] Pfam:PF02472) -48.3038 0.0421 0.9579
6298 Mismatch repair (PMID:16482227 [ISS] TIGR_TIGRFAMS:TIGR01070) -24.2468 0.0476 0.9524
9089 Lysine biosynthetic process via diaminopimelate (GO_REF:0000011 [ISS] TIGR_TIGRFAMS:TIGR00656) 62.61262 0.9557 0.0443
6556 S-adenosylmethionine biosynthetic process (PMID:16482227 [ISS] TIGR_TIGRFAMS:TIGR01034) 51.23363 0.957 0.043
6436 Tryptophanyl-tRNA aminoacylation (PMID:16482227 [ISS] TIGR_TIGRFAMS:TIGR00233) 70.56015 0.9705 0.0295
16114 Terpenoid biosynthetic process (PMID:16482227 [ISS] TIGR_TIGRFAMS:TIGR00154) 60.77005 0.9706 0.0294
42255 Ribosome assembly (PMID:16482227 [ISS] Pfam:PF00573) 1.8E + 308 0.9757 0.0243
6402 mRNA catabolic process (PMID:16482227 [ISS] UniProtKB:P05055) 82.09836 0.9873 0.0127
  1. aLower/Upper tail: Lower and Upper tail values show the mass in the permutation based p-value distribution below or above the value of the test statistic.
  2. bP values represented as 0 are less than 10-16.