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Table 2 Codon usages of Nematodirus oiratianus and N. spathiger mitochondrial DNA encoded proteins

From: Characterization of the complete mitochondrial genomes of Nematodirus oiratianus and Nematodirus spathiger of small ruminants

Amino acid Codon Number Frequency (%) Amino acid Codon Number Frequency (%)
NO NS NO NS NO NS NO NS
Phe TTT 432 441 12.61 12.88 IIe ATT 229 245 6.68 7.16
Phe TTC 8 9 0.23 0.26 IIe ATC 10 4 0.29 0.12
Leu TTA 375 314 10.95 9.17 Met ATA 150 125 4.38 3.65
Leu TTG 160 194 4.67 5.67 Met ATG 69 80 2.01 2.34
Ser TCT 75 89 2.19 2.6 Thr ACT 74 74 2.16 2.16
Ser TCC 2 10 0.06 0.29 Thr ACC 9 10 0.26 0.29
Ser TCA 48 33 1.4 0.96 Thr ACA 21 17 0.61 0.5
Ser TCG 14 11 0.41 0.32 Thr ACG 10 8 0.29 0.23
Tyr TAT 182 190 5.31 5.55 Asn AAT 135 130 3.94 3.8
Tyr TAC 9 5 0.26 0.15 Asn AAC 4 8 0.12 0.23
Term TAA 5 6 0.15 0.18 Lys AAA 49 41 1.43 1.2
Term TAG 2 1 0.06 0.03 Lys AAG 52 59 1.52 1.72
Cys TGT 39 39 1.14 1.14 Ser AGT 141 164 4.12 4.79
Cys TGC 2 0 0.06 0 Ser AGC 3 4 0.09 0.12
Trp TGA 41 32 1.2 0.93 Ser AGA 50 30 1.46 0.88
Trp TGG 29 38 0.85 1.11 Ser AGG 28 31 0.82 0.91
Leu CTT 14 16 0.41 0.47 Val GTT 141 146 4.12 4.27
Leu CTC 4 3 0.12 0.09 Val GTC 12 12 0.35 0.35
Leu CTA 12 11 0.35 0.32 Val GTA 94 76 2.74 2.22
Leu CTG 5 11 0.15 0.32 Val GTG 43 64 1.26 1.87
Pro CCT 41 45 1.2 1.31 Ala GCT 72 69 2.1 2.02
Pro CCC 5 11 0.15 0.32 Ala GCC 11 14 0.32 0.41
Pro CCA 22 15 0.64 0.44 Ala GCA 17 18 0.5 0.53
Pro CCG 9 6 0.26 0.18 Ala GCG 4 8 0.12 0.23
His CAT 46 49 1.34 1.43 Asp GAT 64 63 1.87 1.84
His CAC 10 5 0.29 0.15 Asp GAC 4 4 0.12 0.12
Gln CAA 18 23 0.53 0.67 Glu GAA 41 30 1.2 0.88
Gln CAG 22 18 0.64 0.53 Glu GAG 33 44 0.96 1.29
Arg CGT 26 27 0.76 0.79 Gly GGT 127 133 3.71 3.89
Arg CGC 0 0 0 0 Gly GGC 5 6 0.15 0.18
Arg CGA 4 1 0.12 0.03 Gly GGA 28 17 0.82 0.5
Arg CGG 1 3 0.03 0.09 Gly GGG 34 33 0.99 0.96
  1. NO: N. oiratiuns; NS: N. spathiger; Total number of codon are 3426 for N. oiratiuns, and 3423 for N. spathiger, excluding the incomplete termination codons.