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Table 2 Biological process and molecular function GO terms with the 15 highest scores

From: Transcriptome sequencing and analysis of the zoonotic parasite Spirometra erinacei spargana (plerocercoids)

Category

Level

GO ID

GO terms

Representationa

Scorec

Number

Percentageb

Biological process

5

GO:0044260

Cellular macromolecule metabolic process

213

31.84%

74.85

 

6

GO:0044267

Cellular protein metabolic process

164

24.51%

73.52

 

5

GO:0010467

Gene expression

128

19.13%

71.09

 

7

GO:0006412

Translation

82

12.26%

70.64

 

6

GO:0034645

Cellular macromolecule biosynthetic process

123

18.39%

62.53

 

4

GO:0043170

Macromolecule metabolic process

229

34.23%

62.04

 

5

GO:0019538

Protein metabolic process

179

26.76%

55.76

 

4

GO:0050794

Regulation of cellular process

107

15.99%

45.18

 

4

GO:0044249

Cellular biosynthetic process

146

21.82%

42.06

 

5

GO:0009059

Macromolecule biosynthetic process

123

18.39%

37.73

 

6

GO:0016310

Phosphorylation

53

7.92%

34.29

 

4

GO:0006810

Transport

76

11.36%

29.17

 

8

GO:0006468

Protein phosphorylation

35

5.23%

28.24

 

5

GO:0007165

Signal transduction

58

8.67%

28.05

 

4

GO:0055114

Oxidation-reduction process

42

6.28%

27.96

Molecular function

9

GO:0005524

ATP binding

100

12.12%

100

 

6

GO:0032550

Purine ribonucleoside binding

135

16.36%

84

 

5

GO:0035639

Purine ribonucleoside triphosphate binding

135

16.36%

82.2

 

4

GO:1901265

Nucleoside phosphate binding

186

22.55%

78.48

 

4

GO:0043168

Anion binding

162

19.64%

70.46

 

4

GO:0003676

Nucleic acid binding

112

13.58%

69.51

 

5

GO:0000166

Nucleotide binding

186

22.55%

66.35

 

8

GO:0032559

Adenyl ribonucleotide binding

100

12.12%

61.8

 

5

GO:0046872

Metal ion binding

88

10.67%

54.83

 

5

GO:0032549

Ribonucleoside binding

136

16.48%

52.84

 

5

GO:0001883

Purine nucleoside binding

135

16.36%

50.4

 

7

GO:0032555

Purine ribonucleotide binding

135

16.36%

50.4

 

5

GO:0003723

RNA binding

56

6.79%

38.19

 

7

GO:0030554

Adenyl nucleotide binding

100

12.12%

37.8

 

9

GO:0005525

GTP binding

37

4.48%

37

  1. aNote that individual GO categories can have multiples mappings. The representation means the number of SpAEs that can be mapped to a certain GO term.
  2. bThe representation percentage is based on the total number of GO mappings in each of the two major ontologies (biological process: 669, molecular function: 825).
  3. cScore was calculated by BLAST2GO according to number of different sequences annotated at a child GO term and distance to node of the child GO term.
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