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Table 2 Flavivirus positive pools

From: Molecular characterization of flaviviruses from field-collected mosquitoes in northwestern Italy, 2011–2012

Flavivirus strain ID GenBank accession number Detected virus Pool size Collection date NS5 short PCR NS5 long PCR DNA PCR
Oc941-AL KF882512 MMV 200 4 Aug + + /
Oc942-AL KF882513 MMV 186 4 Aug/AL + + /
USU/m2080-NO KF882514 USUV 3 15 Sept/NO + + /
Aa564-TO KF801589 AeFV 1 1 Aug/TO + + /
Av569-VC KF801590 ISF (DNA form) 11 1 Aug/VC + - +
Oc599-AL KF801593 MMV 200 8 Aug/AL + + /
Aa607-CN KF801591 AeFV 5 8 Aug/CN + + /
Aa610-TO KF801592 AeFV 3 8 Aug/TO + + /
USU/m688-NO KF801594 USUV 200 22 Aug/NO + + /
USU/m689-NO KF801595 USUV 111 22 Aug/NO + + /
Oc694-VC / ISF (DNA form?) 158 22 Aug/VC + - ND
USU/m699-NO KF801596 USUV 203 22 Aug/NO + + /
Av707-VC / ISF (DNA form) 10 22 Aug/VC + - +
Og709-VC / ISF (DNA form) 10 22 Aug/VC + - +
Av710-VC KF801597 ISF (DNA form) 4 22 Aug/ + - +
Oc748-AL KF801598 MMV 88 28 Aug/AL + + /
Aa756-CN KF801599 AeFV 2 29 Aug/CN + + /
USU/m851-NO KF801600 USUV 18 5 Sept/NO + + /
Av852-NO / ISF (DNA form) 1 5 Sept/NO + - +
Av1012-VC / ISF (DNA form?) 4 19 Sept/VC + - ND
Av1014-VC KF801601 ISF (DNA form) 6 19 Sept/VC + - +
Aa1015-TO / ISF (DNA form?) 4 19 Sept/TO + - ND
Aa1019-TO / AeFV 7 19 Sept/TO + ND /
Av1020-TO KF801602 ISF (DNA form) 1 19 Sept/TO + - +
Aa1028-BI KF801603 AeFV 2 19 Sept/BI + + /
Av1106-TO KF801604 ISF (DNA form) 3 26 Sept/TO + - +
Aa1108-AL KF801605 AeFV 2 26 Sept/AL + + /
Aa1109-TO KM206278 AeFV 6 26 Sept/TO + + /
Aa1113-CN / AeFV 10 26 Sept/CN + ND /
Av1116-CN KF801606 ISF (DNA form) 1 26 Sept/CN + - +
Av1228-VC KF801607 ISF (DNA form) 4 3 Oct/VC + - +
Av1232-NO KF801608 ISF (DNA form) 1 3 Oct/NO + - +
Aa1243-TO KF801609 AeFV 4 5 Oct/TO + + /
Aa1245-BI KF801610 AeFV 4 5 Oct/BI + + /
Aa1326-AL KF801611 AeFV 5 10 Oct/AL + + /
Aa1332-AL KF801612 AeFV 2 10 Oct/AL + + /
Av1337-NO KF801613 ISF (DNA form) 3 12 Oct/NO + - +
  1. The Flavivirus strain ID code refers to mosquito species (Oc: Oc. caspius, Aa: Ae. albopictus, Av: Ae. vexans, Og: Oc. geniculatus, Cp: Cx. pipiens), sample no.- province (TO, Torino; CN, Cuneo; NO, Novara; BI, Biella; VC, Vercelli; AL, Alessandria); for USUV ID: virus/organism (mosquito), sample no.-province. ND: not done for lack of material.