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Table 2 Prediction of subcellular localization of 23 pest and 8 plant β-CAs

From: Beta carbonic anhydrases: novel targets for pesticides and anti-parasitic agents in agriculture and livestock husbandry

Species name

Entry ID

β-CA ID

cTP

mTP

SP

Other

RC

Loc

Acyrthosiphon pisum

J9K706

BCA1

-

0.473

0.050

0.631

5

-

Acyrthosiphon pisum

Predicted

BCA2

-

0.579

0.043

0.536

5

M

Ancylostoma caninum

FC551456

BCA

-

0.466

0.046

0.514

5

-

Ascaris suum

F1LE18

BCA

-

0.388

0.079

0.406

5

-

Caligus clemensi

C1C2M7

BCA

-

0.210

0.040

0.873

2

-

Camponotus floridanus

E2ANQ9

BCA

-

0.325

0.051

0.735

3

-

Ceratitis capitata

XP_004537221.1

BCA

-

0.549

0.039

0.512

5

M

Culex quinquefasciatus

B0WKV7

BCA

-

0.573

0.032

0.507

5

M

Dendroctonus ponderosae

J3JTM9

BCA

-

0.270

0.064

0.742

3

-

Entamoeba dispar

B0E7M0

BCA

-

0.114

0.158

0.766

2

-

Entamoeba histolytica

C4LXK3

BCA

-

0.113

0.151

0.779

2

-

Entamoeba nuttalli

K2GQM0

BCA

-

0.132

0.142

0.763

2

-

Haemonchus contortus

U6PDI1

BCA

-

0.587

0.057

0.403

5

M

Ichthyophthirius multifiliis

G0QYZ1

BCA1

-

0.071

0.046

0.946

1

-

Ichthyophthirius multifiliis

G0QPN9

BCA2

-

0.181

0.040

0.872

2

-

Ichthyophthirius multifiliis

Predicted

BCA3

-

0.059

0.078

0.954

1

-

Ichthyophthirius multifiliis

Predicted

BCA4

-

0.050

0.178

0.868

2

-

Lepeophtheirus salmonis

D3PI48

BCA

-

0.126

0.068

0.889

2

-

Necator americanus

ETN68732.1

BCA

-

0.379

0.036

0.604

4

-

Solenopsis invicta

E9IP13

BCA

-

0.326

0.052

0.756

3

-

Tribolium castaneum

D6WK56

BCA

-

0.054

0.097

0.938

1

-

Trichinella spiralis

E5SH53

BCA

-

0.876

0.028

0.177

2

M

Trichoplax adhaerens

B3S5Y1

BCA

-

0.582

0.038

0.459

5

M

Arabidopsis thaliana

Q9ZUC2

BCA

0.043

0.171

0.108

0.923

2

-

Pisum sativum

P17067

BCA

0.969

0.050

0.014

0.023

1

C

Gossypium hirsutum

Q8LSC8

BCA

0.947

0.154

0.008

0.019

2

C

Nicotiana tabacum

P27141

BCA

0.956

0.059

0.019

0.039

1

C

Vitis vinifera

D7TWP2

BCA

0.902

0.183

0.016

0.034

2

C

Solanum tuberosum

I2FJZ8

BCA

0.954

0.051

0.024

0.045

1

C

Populus trichocarpa

B9GHR1

BCA

0.931

0.231

0.021

0.012

2

C

Capsella rubella

R0H8X7

BCA

0.040

0.208

0.176

0.907

2

-

  1. cTP = a chloroplast transit peptide, mTP = a mitochondrial targeting peptide, SP = secretory pathway, Loc (predicted localization) where C = chloroplastic, M = mitochondrial, S = secretory, − = other, RC = reliability class, from 1 to 5, where 1 indicates the strongest prediction. RC is a measure of the difference between the highest and the second highest output scores. There are 5 reliability classes, defined as follows: 1: diff ≥ 0.800, 2: 0.800 > diff ≥ 0.600, 3: 0.600 > diff ≥ 0.400, 4: 0.400 > diff ≥ 0.200 and 5: 0.200 > diff. Thus, the lower the value of RC the safer the prediction.
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Parasites & Vectors

ISSN: 1756-3305

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