Table 3 Nucleotide and/or predicted amino acid (aa) sequence differences for mt protein-coding and ribosomal RNA genes among Chabertia erschowi (CE) and Chabertia ovina China isolate (COC) and Australia isolate (COA)
Gene | Nucleotide length (bp) | Nucleotide difference (%) | Number of aa | aa difference (%) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
CE | COC | COA | CE/COC | CE/COA | COC/COA | CE | COC | COA | CE/COC | CE/COA | COC/COA | |
atp 6 | 600 | 600 | 597 | 14.33 | 14.83 | 5.00 | 199 | 199 | 198 | 11.06 | 14.57 | 7.54 |
nad 1 | 873 | 873 | 873 | 13.63 | 13.97 | 4.35 | 290 | 290 | 290 | 5.17 | 8.62 | 3.79 |
nad 2 | 840 | 840 | 840 | 19.40 | 20.12 | 3.93 | 279 | 279 | 279 | 17.92 | 17.20 | 2.15 |
nad 3 | 339 | 336 | 336 | 17.40 | 17.70 | 6.55 | 112 | 112 | 112 | 16.96 | 16.07 | 7.14 |
nad 4 | 1230 | 1230 | 1233 | 17.64 | 18.82 | 5.43 | 409 | 409 | 410 | 14.67 | 17.80 | 4.88 |
nad 4L | 234 | 234 | 234 | 11.97 | 12.39 | 4.70 | 77 | 77 | 77 | 7.79 | 7.79 | 0 |
nad 5 | 1582 | 1582 | 1582 | 17.51 | 17.32 | 4.87 | 527 | 527 | 527 | 14.42 | 13.66 | 2.47 |
nad 6 | 435 | 432 | 432 | 19.08 | 19.31 | 5.56 | 144 | 143 | 143 | 15.97 | 17.36 | 1.40 |
cox 1 | 1578 | 1578 | 1578 | 11.98 | 12.86 | 4.06 | 525 | 525 | 525 | 0.57 | 0.57 | 0 |
cox 2 | 696 | 696 | 696 | 13.36 | 13.65 | 4.89 | 231 | 231 | 231 | 0.87 | 0.87 | 0 |
cox 3 | 766 | 766 | 771 | 14.75 | 14.01 | 5.06 | 255 | 255 | 256 | 3.14 | 2.35 | 1.17 |
cyt b | 1113 | 1113 | 1113 | 16.80 | 16.89 | 4.67 | 370 | 370 | 370 | 9.73 | 9.73 | 1.08 |
rrn S | 696 | 696 | 700 | 7.33 | 7.71 | 1.86 | - | - | - | - | - | - |
rrn L | 970 | 962 | 962 | 13.61 | 13.92 | 3.20 | - | - | - | - | - | - |