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Table 3 Sequences of Heligmosomidae used in phylogenetic analysis

From: Heligmosomoides neopolygyrus Asakawa & Ohbayashi, 1986, a cryptic Asian nematode infecting the striped field mouse Apodemus agrarius in Central Europe

Parasite and host

Locality

CO1

cytb

ITS1

ITS2

28S rDNA

Source

H. neopolygyrus, A. agrarius

Gdańsk, Poland

KF765455

KF765451

KF765458

KF765463

KF765468

This study

H. neopolygyrus, A. agrarius

Wrocław, Poland

KJ994541

KJ994551

   

This study

H. polygyrus, A. flavicollis

Wrocław, Poland

KF765456

KF765452

KF765459

KF765464

KF765469

This study

H. polygyrus, A. sylvaticus

Jar, Norway

KJ994543

KJ994553

KJ994557

KJ994560

Identical to KF765469

This study

H. polygyrus, A. sylvaticus

Kildare, Eire

KJ994542

KJ994548

   

This study

H.p. polygyrus, A.sylvaticus

Norfolk

KJ994544

KJ994549

KJ994555

KJ994558

Identical to KF765469

This study

H. p.polygyrus, A. sylvaticus

98911It, Italy

  

AM409071

AM409087

ND

9

H. p.polygyrus, A. sylvaticus

Slovakia 11112Sa

ND

AM408297

   

10

H.p. polygyrus, A. sylvaticus

France 10192 F

ND

AM408288

   

10

H.p.polygyrus, A.sylvaticus

Pancas, Portugal

KJ994545

KJ994550

   

This study

H. p.polygyrus, A. sylvaticus

Minorca 7672Mi

ND

AJ971171

   

11

H. bakeri, M. musculus

Nottingham strain

DQ408627

KJ994554

DQ408624

DQ408624

AM039747

5

H. bakeri, M. musculus

Maizels genome project 3

Contig 252200

Contig 252200

    

H.p. corsicum, A. mystacinus 1

Turkey

  

AM409074

AM409090

ND

11

H.p. corsicum, A. mystacinus 1

Turkey

KJ994540

KJ994547

KJ994556

KJ994559

KJ994539

This study

H.p. corsicum, M. musculus 1

Corsica 9702 F3

ND

AJ971230

   

11

H. glareoli, M. glareolus

Edinburgh, Scotland UK

KF765457

KF765453

KF765460

KF765465

KF765470

This study

H. glareoli, M. glareolus

Urwitałt Forest, Poland

DQ408634

ND

   

5

H. glareoli, M. glareolus

Anglesey, Wales, UK

KJ994546

KJ94552

   

This study

H. kurilensis kobayashii, A. speciosus

Japan

ND

AJ971146

AM409077

AM409093

ND

10

H. mixtum, M. glareolus

Wrocław, Poland

ND

KF765454

KF765461

KF765466

KF765471

This study

H. mixtum, M. glareolus

Mazury, Poland

DQ408635

ND

   

5

H. mixtum, M. glareolus

Spain 1340

ND

AJ971145

   

11

H.costellatum, M. arvalis

Wrocław, Poland

  

KF765462

KF765467

KF765472

This study

O. erbaevae, O. daurica

Russia, Bouriatia

  

AY332647

AY333381

AF210038, AF210014, AF209991

20

  1. 1This subspecies was originally described from Mus musculus domesticus from Corsica; however, ITS1 and ITS2 sequences are available only for parasites collected from Apodemus mystacinus from Turkey and linked to specimens from Corsica by identity of their cytb sequences ([11]).
  2. 2Sequences for H. p. polygyrus Jar and H. bakeri cytb are truncated relative to the other isolates.
  3. 3Sequence obtained through 959 Nematode Genome project (http://www.nematodes.org/nematodegenomes/index.php/959_Nematode_Genomes). ND indicates sequence not available for inclusion in the concatenated alignments (mitochondrial or nuclear). A blank cell indicates a taxon not included in the relevant alignment.
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