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Table 1 Codons under episodic diversifying selection in specific branches

From: The glycoprotein TRP36 of Ehrlichia sp. UFMG-EV and related cattle pathogen Ehrlichia sp. UFMT-BV evolved from a highly variable clade of E. canis under adaptive diversifying selection

Codons

Branchesa

From

To

Type of substitutionb

10

7

aac (N)

ggt (G)

dN and dS

21

7

caa (Q)

tca (S)

dN

28

7

tca (S)

gta (V)

dN

1

gta (V)

aca (T)

dN

39

7

cat (H)

agt (S)

dN

1

agt (S)

cat (H)

dN

40

7

cct (P)

ggt (G)

dN

51

6

aat (N)

ggt (G)

dN

77

15

gct (A)

gtt (V)

dN

B1

gct (A)

gtt (V)

dN

105

2

tat (Y)

gaa (E)

dN

124

5

aat (N)

tct (S)

dN

142

8

tct (S)

ggt (G)

dN

10

tct (S)

gaa (E)

dN and dS

145

1

gct (A)

gtt (V)

dN

A1

gtt (V)

caa (Q)

dN and dS

  1. aInternal and external branches are identified by numbers and letters and numbers as in Figure 2.
  2. bType of substitution: non-synonymous (dN) and synonymous (dS).