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Table 3 The PCR-based diagnostic test CF700 revealed the presence of C. faba or closely related species in benthos obtained at sites of focal occurrence of adult C. faba individuals

From: Intermediate hosts of the trematode Collyriclum faba (Plagiochiida: Collyriclidae) identified by an integrated morphological and genetic approach

Species

Sampling site and date

Total N examined

Positive

Prevalence [%]

Voucher IDs of CF700-positive specimens (NCBI GenBank IDs)

Mollusca:

     

Bythinella austriaca

1

59

0

0

-

Bythinella austriaca

2

10

1

10

1066 (KM594114)

Turbellaria:

     

Dendrocoelum lacteum

1

1

0

0

-

Dugesia gonocephala

1

4

0

0

-

Nematoda:

     

Gordius sp.

1

3

0

0

-

Crustacea:

     

Gammarus fossarum

1

121

19

16

250, 252, 257 (KC543332), 260 (KC543333), 266, 267, 272, 275, 283, 287, 288, 291, 198, 305, 306, 307, 316, 318, 319 (KC543334)

Gammarus fossarum

2

20

0

0

-

Gammarus fossarum

6

81

1

1

486 (KC543343)

Plecoptera:

     

Isoperla grammatica

1

18

2

11

776, 786 (KC543346)

Isoperla sp.

2

20

11

55

983-990, 991 (KC543349), 992 (KC543350), 1009

Leuctra braueri

1

3

0

0

-

Leuctra prima

1

1

0

0

-

Leuctra teriolensis × rauscheri

1

3

0

0

-

Perla bipunctata

6

1

0

0

-

Perla bipunctata

1

24

10

42

799, 800, 804, 806, 808, 818 (KC543347), 820, 822 (KC543348), 823, 826

Perla burmeisteriana

6

3

0

0

-

Perla sp.

2

20

6

30

1047, 1049, 1053, 1058, 1059, 1062

Protonemura auberti

6

7

0

0

-

Ephemeroptera:

     

Baetis alpinus

1

17

0

0

-

Ecdyonurus venosus

1

26

11

42

369, 376 (KC543339), 379 (KC543340), 381, 384, 387, 389, 391 (KC543341), 392, 393, 394

Ecdyonurus venosus

6

18

0

0

-

Ecdyonurus sp., juv.

6

4

0

0

-

Epeorus assimilis

6

1

0

0

-

Habroleptoides modesta

1

1

0

0

-

Rhithrogena carpatoalpina

6

1

0

0

-

Rhithrogena picteti × iridina

1

83

27

33

325, 326, 327, 330, 332 (KC543335), 333 (KC543336), 335 (KC543337), 336 (KC543338), 339, 340, 342, 349, 350, 353, 356, 359, 360, 362, 363, 364, 365, 367, 430 (KC543342), 651 (KC543344), 668, 694, 695 (KC543345)

Rhithrogena sp.

2

20

2

10

-

Seratella ignita

6

1

0

0

-

Trichoptera:

     

Drusus discolor

1

1

0

0

-

Drusus sp.

1

5

0

0

-

Hydropsyche instabilis

6

1

1

100

572

Philopotamus ludificatus

6

4

0

0

-

Plectrocnemia conspersa

6

7

0

0

-

Potamophylax luctuosus

6

3

0

0

-

Potamophylax sp., juv.

6

2

0

0

-

Rhyacophila hirticornis

1

1

0

0

-

Rhyacophila polonica

1

12

0

0

-

Rhyacophila polonica

6

1

0

0

-

Rhyacophila tristis

1

1

0

0

-

Rhyocophila hirticornis

1

3

0

0

-

Wormaldia copiosa

1

3

0

0

-

Diptera:

     

Dicranota sp.

1

1

0

0

-

Hexatoma sp.

1

1

0

0

-

Coleoptera:

     

Elmis aenea

6

1

0

0

-

Aves (controls from definitive hosts):

     

Hirundo rustica

    

827 (KM594115)

Erithacus rubecula

    

865 (KM594116)

Sylvia atricapilla

    

866 (KM594117)

Regulus regulus

    

870 (KM594118)

  1. Sampling sites and dates are indicated according to Table 1. We denoted any tests which yielded a PCR product of the expected length (~402 bp) as positive. Lack of PCR product or PCR products of different length were considered negative tests. Representative PCR products were subjected to Sanger sequencing. The NCBI GenBank accession numbers are indicated (KC543332-KC543350, KM594114-KM594118). The single-band PCR products of unexpected size were sequenced as well, but none of them correspond to any sequence available in the NCBI GenBank database.