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Table 1 Localities, sample information and genetic diversity of S. japonicum based on three mtDNA genes and microsatellites

From: Geographical genetic structure of Schistosoma japonicum revealed by analysis of mitochondrial DNA and microsatellite markers

Population location (and abbreviation used)

Latitude

Longitude

mtDNA genes

Microsatellites

N 1 *

N 2 *

Nucleotide diversity (Ï€)

N 3 *

N 4 *

G

N 5 *

H o

H e

HWE

F IS

Anhui Province, Guichi Country, Minsheng Village (AHGC)

30.67

117.45

4

1

0

70(66)

54

52

22

0.79

0.88

***

0.13

Anhui Province, Tongling Country, Laozhou Island, Guanghui Village (AHTN)

30.94

117.76

2

2

0.0033

34(32)

27

25

23

0.82

0.89

***

0.09

Hubei Province, Shashi City, Maling Village (HBSH)

30.32

112.35

4

2

0.0001

47(43)

27

25

25

0.84

0.85

*

0.04

Hunan Province, Changde City, Wuyi Village (HNCD)

28.94

112.16

4

4

0.0050

44(40)

32

31

22

0.86

0.87

**

0.03

Hunan Province, Yueyang City, Laogang Village (HNYY)

29.34

113.07

4

4

0.0042

77(73)

55

54

45

0.79

0.91

***

0.14

Jiangxi Province, Duchang Country, Tangmei Village (JXDC)

29.20

116.50

4

3

0.0031

98(94)

68

67

71

0.80

0.90

***

0.11

Sichuan Province, Xichang City, Daxing Township, Shian and Jianxin Village combined (SCXC)

27.50

102.20

3

3

0.0012

31(28)

23

22

20

0.75

0.85

***

0.15

Yunnan Province, Dali City, Eryuan Country (YNEY)

26.12

99.95

4

4

0.0009

20

14

13

15

0.60

0.84

***

0.31

Chinese Taiwan (CTW)

23.85

120.92

5

4

0.0003

18

15

11

6

0.25

0.30

NS

0.25

Indonesia (IN)

−2.20

120.10

3

3

0.0010

18

16

9

6

0.30

0.29

NS

0.03

Japan (JP)

36.50

138.30

2

2

0.0003

4

nc

nc

4

nc

nc

nc

nc

The Philippines (PH)

14.69

121.37

3

2

0.0002

25

19

5

3

nc

nc

nc

nc

  1. N1: number of individuals for mtDNA analysis; N2: number of mtDNA haplotypes; N3: number of individuals for microsatellite analysis, in parentheses is the number of individual data from previous work [21]; N4: number of individuals for MLG analysis excluding missing data; N5: number of individuals for population genetic analysis after removing near-identical MLGs; G, number of MLGs; nc, not calculated because of small sample size; *: P < 0.05; **: P < 0.01; ***: P < 0.001; NS: no significance.