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Table 1 Localities, sample information and genetic diversity of S. japonicum based on three mtDNA genes and microsatellites

From: Geographical genetic structure of Schistosoma japonicum revealed by analysis of mitochondrial DNA and microsatellite markers

Population location (and abbreviation used) Latitude Longitude mtDNA genes Microsatellites
N 1 * N 2 * Nucleotide diversity (π) N 3 * N 4 * G N 5 * H o H e HWE F IS
Anhui Province, Guichi Country, Minsheng Village (AHGC) 30.67 117.45 4 1 0 70(66) 54 52 22 0.79 0.88 *** 0.13
Anhui Province, Tongling Country, Laozhou Island, Guanghui Village (AHTN) 30.94 117.76 2 2 0.0033 34(32) 27 25 23 0.82 0.89 *** 0.09
Hubei Province, Shashi City, Maling Village (HBSH) 30.32 112.35 4 2 0.0001 47(43) 27 25 25 0.84 0.85 * 0.04
Hunan Province, Changde City, Wuyi Village (HNCD) 28.94 112.16 4 4 0.0050 44(40) 32 31 22 0.86 0.87 ** 0.03
Hunan Province, Yueyang City, Laogang Village (HNYY) 29.34 113.07 4 4 0.0042 77(73) 55 54 45 0.79 0.91 *** 0.14
Jiangxi Province, Duchang Country, Tangmei Village (JXDC) 29.20 116.50 4 3 0.0031 98(94) 68 67 71 0.80 0.90 *** 0.11
Sichuan Province, Xichang City, Daxing Township, Shian and Jianxin Village combined (SCXC) 27.50 102.20 3 3 0.0012 31(28) 23 22 20 0.75 0.85 *** 0.15
Yunnan Province, Dali City, Eryuan Country (YNEY) 26.12 99.95 4 4 0.0009 20 14 13 15 0.60 0.84 *** 0.31
Chinese Taiwan (CTW) 23.85 120.92 5 4 0.0003 18 15 11 6 0.25 0.30 NS 0.25
Indonesia (IN) −2.20 120.10 3 3 0.0010 18 16 9 6 0.30 0.29 NS 0.03
Japan (JP) 36.50 138.30 2 2 0.0003 4 nc nc 4 nc nc nc nc
The Philippines (PH) 14.69 121.37 3 2 0.0002 25 19 5 3 nc nc nc nc
  1. N1: number of individuals for mtDNA analysis; N2: number of mtDNA haplotypes; N3: number of individuals for microsatellite analysis, in parentheses is the number of individual data from previous work [21]; N4: number of individuals for MLG analysis excluding missing data; N5: number of individuals for population genetic analysis after removing near-identical MLGs; G, number of MLGs; nc, not calculated because of small sample size; *: P < 0.05; **: P < 0.01; ***: P < 0.001; NS: no significance.