Table 5 Amino acid variations in Leishmania killicki and Leishmania tropica sequences at the seven loci assessed by MLST
Locus | Position | Amino acid | |
|---|---|---|---|
L. killicki | L. tropica (number of strains/total number of strains) | ||
03.0980 | 24 | G | G |
231 | L | L | |
623 | V | V (0.2), A(0.8) | |
630 | S | S | |
04.0580 | 6 | V | V |
36 | H | H (0.96), R (0.04) | |
258 | I | I (0.96), V (0.04) | |
261 | V | V (0.92), A(0.08) | |
421 | V | V (0.44), I (0.56) | |
463 | L | L | |
711 | R | R | |
10.0560 | 24 | F | F |
42 | G | G | |
51 | V | V | |
54 | A | A | |
61 | A | S (0.6), A (0.4) | |
496 | D | D (0.96), N (0.04) | |
535 | Y | Y (0.88), N (0.12) | |
545 | I | I (0.96), V (0.04) | |
619 | T | T (0.64), A (0.36) | |
633 | E | E | |
12.0010 | 72 | D | D |
75 | G | G | |
120 | S | S | |
156 | K | K | |
249 | R | R | |
261 | S | S | |
344 | A | A (0.56), V (0.44) | |
438 | N | N (0.96), K (0.04) | |
507 | G | G | |
14.0130 | 77 | L | L (0.88), Q (0.12) |
85 | S | P (0.52), S (0.48) | |
246 | E | E | |
303 | T | T | |
364 | M | V (0.52), M (0.48) | |
367 | R | R (0.36), H (0.48), C (0.16) | |
470 | Q | R (0.52), Q (0.48) | |
31.0280 | 7 | L | L (0.52), I (0.48) |
107 | N | N (0.48), S (0.52) | |
110 | I | I (0.48) ,S (0.52) | |
120 | A | A | |
187 | I | I (0.36),V (0.64) | |
216 | A | A | |
229 | T | T (0.88), A (0.12) | |
239 | D | D (0.92), G (0.08) | |
417 | E | E | |
553 | Q | Q (0.92), K (0.08) | |
649 | F | F (0.92), L (0.08) | |
717 | S | S | |
807 | V | V | |
31.2610 | 133 | L | L |
162 | A | A | |
210 | A | A | |
327 | I | I | |
368 | L | P (0.68), L (0.32) |