Table 2 The features of the mitochondrial genomes of Paramphistomum leydeni (PL) and Paramphistomum cervi (PC)
Gene | Positions and nt sequence sizes (bp) | Start and stop codons | tRNA Anti-codons | Intergenic nt (bp) | ||||
|---|---|---|---|---|---|---|---|---|
|  | PL (5’-3’) | PC (5’-3’) | PL | PC | PL | PC | PL | PC |
cox3 | 1-645 (645) | 1-645 (645) | ATG/TAG | ATG/TAG | Â | Â | 0 | 0 |
tRNA-His (H) | 647-714 (68) | 647-715 (69) | Â | Â | GTG | GTG | 1 | 3 |
cytb | 717-1829 (1113) | 720-1832 (1113) | ATG/TAG | ATG/TAG | Â | Â | 2 | 4 |
SNCR | 1830-1894 (64) | 1833-1890 (58) | Â | Â | Â | Â | 0 | 0 |
nad4L | 1895-2158 (264) | 1891-2154 (264) | ATG/TAG | ATG/TAG | Â | Â | 0 | 0 |
nad4 | 2119-3399 (1281) | 2115-3395 (1281) | GTG/TAG | GTG/TAG |  |  | −40 | −40 |
tRNA-Gln (Q) | 3404-3469 (66) | 3398-3462 (65) | Â | Â | TTG | TTG | 4 | 2 |
tRNA-Phe (F) | 3501-3567 (67) | 3489-3553 (65) | Â | Â | GAA | GAA | 31 | 26 |
tRNA-Met (M) | 3565-3629 (65) | 3553-3615 (63) |  |  | CAT | CAT | −3 | −1 |
atp6 | 3630-4145 (516) | 3616-4131 (516) | ATG/TAG | ATG/TAG | Â | Â | 0 | 0 |
nad2 | 4153-5025 (873) | 4139-5011 (870) | ATA/TAG | GTG/TAG | Â | Â | 7 | 7 |
tRNA-Val (V) | 5049-5112 (64) | 5014-5077 (64) | Â | Â | TAC | TAC | 23 | 2 |
tRNA-Ala (A) | 5122-5187 (66) | 5085-5154 (70) | Â | Â | TGC | TGC | 9 | 7 |
tRNA-Asp (D) | 5197-5266 (70) | 5165-5229 (65) | Â | Â | GTC | GTC | 9 | 10 |
nad1 | 5269-6165 (897) | 5233-6129 (897) | ATG/TAG | ATG/TAG | Â | Â | 2 | 3 |
tRNA-Asn (N) | 6170-6235 (66) | 6142-6207 (66) | Â | Â | GTT | GTT | 4 | 12 |
tRNA-Pro (P) | 6235-6300 (66) | 6208-6270 (63) |  |  | TGG | TGG | −1 | 0 |
tRNA-Ile (I) | 6302-6363 (62) | 6272-6334 (63) | Â | Â | GAT | GAT | 1 | 1 |
tRNA-Lys (K) | 6370-6435 (66) | 6344-6409 (66) | Â | Â | CTT | CTT | 6 | 9 |
nad3 | 6436-6792 (357) | 6410-6766 (357) | ATG/TAG | ATG/TAG | Â | Â | 0 | 0 |
tRNA-Ser (S1) | 6810-6868 (59) | 6785-6843 (59) | Â | Â | GCT | GCT | 17 | 18 |
tRNA-Trp (W) | 6878-6941 (64) | 6853-6915 (63) | Â | Â | TCA | TCA | 9 | 9 |
cox1 | 6942-8486 (1545) | 6916-8460 (1545) | ATA/TAG | GTG/TAG | Â | Â | 0 | 0 |
tRNA-Thr (T) | 8500-8561 (62) | 8470-8534 (65) | Â | Â | TGT | TGT | 13 | 9 |
rrnL | 8562-9556 (995) | 8535-9520 (986) | Â | Â | Â | Â | 0 | 0 |
tRNA-Cys (C) | 9557-9623 (67) | 9527-9586 (60) | Â | Â | GCA | GCA | 0 | 6 |
rrnS | 9624-10372 (749) | 9592-10340 (749) | Â | Â | Â | Â | 0 | 5 |
cox2 | 10373-10954 (582) | 10341-10919 (579) | ATG/TAG | ATG/TAG | Â | Â | 0 | 0 |
nad6 | 10948-11400 (453) | 10920-11372 (453) | GTG/TAG | GTG/TAG |  |  | −7 | 0 |
tRNA-Tyr (Y) | 11420-11485 (66) | 11389-11455 (67) | Â | Â | GTA | GTA | 19 | 16 |
tRNA-Leu (L1) | 11496-11557 (62) | 11470-11536 (67) | Â | Â | TAG | TAG | 10 | 14 |
tRNA-Ser (S2) | 11558-11624 (67) | 11538-11609 (72) | Â | Â | TGA | TGA | 0 | 1 |
tRNA-Leu (L2) | 11644-11708 (65) | 11646-11710 (65) | Â | Â | TAA | TAA | 19 | 36 |
tRNA-Arg (R) | 11709-11775 (67) | 11713-11779 (67) | Â | Â | TCG | TCG | 0 | 2 |
nad5 | 11775-13358 (1584) | 11780-13360 (1581) | GTG/TAA | ATG/TAG |  |  | −1 | 0 |
tRNA-Gly (G) | 13359-13431 (73) | 13365-13433 (69) | Â | Â | TCC | TCC | 0 | 4 |
tRNA-Glu (E) | 13440-13507 (68) | 13451-13515 (65) | Â | Â | TTC | TTC | 8 | 17 |
LNCR | 13508-14050 (543) | 13516-14014 (499) | Â | Â | Â | Â | 0 | 0 |