Table 2 Transcriptome assembly metrics
From: Identification of candidate mimicry proteins involved in parasite-driven phenotypic changes
Total number of reads | 528 595 |
Number of reads mapping on raw genome 1 | 471 018 (89%) |
Assembled reads | 462 128 |
Number of gene-contigs | 9093 |
Average length in bp (range; median) | 1266 (212 – 7588; 1097) |
N50 | 945 |
Average coverage (range; median) | 7.03X (4 – 1850; 6.93) |
Average protein length in amino acids (range; median) | 300 (20 – 1992; 258) |
Number of annotated proteins2 | 5949 |