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Table 1 Primers used in the present study

From: Analysis of the complete Fischoederius elongatus (Paramphistomidae, Trematoda) mitochondrial genome

Primer codes

Sequences (5′-3′)

Target gene

References

XCCOX3F

AGYACDGTDGGDTTRCATTT

cox31

Present study

XCCOX3R

CANAYATAATCMACARAATGNCA

cox31

Present study

nxccobF

ATGTCWTWTTGRGCKGCBACNGT

cytb1

Present study

nxccobR

GADVCTCNGGRTGRCAVGCHCC

cytb1

Present study

nxcND4F

GAKTCBCCDTATTCDGARCG

nad41

Present study

nxcND4R

ACHCCNGCHGANANMCCRTGMCC

nad41

Present study

TXCCOX1F

GGHTGAACHRTWTAYCCHCC

cox11

Present study

TXCCOX1R

TGRTGRGCYCAWACDAYAMAHCC

cox11

Present study

XC12SF

AAWAAYGAGAGYGACGGGCG

rrnS1

Present study

XC12SR

TARACTAGGATTAGATACCC

rrnS1

Present study

NxcND5F

TGKTTGCBTCNCGNTTBGGNGATG

nad51

Present study

NxcND5R

TAACACTTRCANAHMCCRTGHGT

nad51

Present study

3CF1

TGCATGTAGTGATAGGTTTGG

cox3- cytb2

Present study

3CR1

AACTAACGTAACATTTGTCAC

cox3- cytb2

Present study

3CF2

TTTGTTTTGTGGTTGCCTTC

cytb-nad42

Present study

3CR2

AACGTAAATTAAACCTCCCCC

cytb-nad42

Present study

3CF3

TGGCGTTTTTGAGTTTGTCTC

nad4-cox12

Present study

3CR3

TCAACGAACTCAATATACTTG

nad4-cox12

Present study

3CF4

TGGTTTCGGGGCTGTGAGAC

cox1-rrnS2

Present study

3CR4

ACCAAGCAAAGAAAATTCTACC

cox1-rrnS2

Present study

3CF5

TGTTAAAAGGCTTTGGTGTG

rrnS-nad52

Present study

3CR5-1

ACCAACCAAACCTACACATC

rrnS-nad52

Present study

3CF6-1

TTACGTTAGTTGGGTTGTTG

nad5-cox32

Present study

3CR6

TTACATCTTTATAAAACACTTTC

nad5-cox32

Present study

  1. 1 short regions amplified by PCR from cox3 (139 bp), cytb (613 bp), nad4 (554 bp), cox1 (497 bp), rrnS (500 bp) and nad5(458 bp). 2 large fragments that were amplified by long-range PCR from cox3-cytb (724 bp), cytb-nad4 (1008 bp), nad4-cox1 (4675 bp), cox1-rrnS (2198 bp), rrnS-nad5 (1981 bp) and nad5-cox3 (1718 bp)