From: Anaplasma infection of Bactrian camels (Camelus bactrianus) and ticks in Xinjiang, China
Pathogen | Target gene | Primers | Final amplicon size (bp) | References | |
---|---|---|---|---|---|
Primer name | Oligonucleotide sequences (5′-3′) | ||||
Anaplasma & Ehrlichia | 16S rRNA | EC9 | TACCTTGTTACGACTT | 1462 | [33] |
EC12A | TGATCCTGGCTCAGAACGAACG | ||||
A. bovis | 16S rRNA | AB1f | CTCGTAGCTTGCTATGAGAAC | 551 | [33] |
AB1r | TCTCCCGGACTCCAGTCTG | ||||
A. phagocytophilum | 16S rRNA | SSAP2f | GCTGAATGTGGGGATAATTTAT | 641 | [33] |
SSAP2r | ATGGCTGCTTCCTTTCGGTTA | ||||
A. marginale | msp4 | Amargmsp4 F | CTGAAGGGGGAGTAATGGG | 344 | [34] |
Amargmsp4 R | GGTAATAGCTGCCAGAGATTCC | ||||
A. ovis | msp4 | Aovismsp4 F | TGAAGGGAGCGGGGTCATGGG | 347 | [34] |
Aovismsp4 R | GAGTAATTGCAGCCAGGGACTCT | ||||
A. platys. | 16S rRNA | PLATYS F | AAGTCGAACGGATTTTTGTC | 506 | [16] |
PLATYS R | CTTTAACTTACCGAACC | ||||
groEL | PLA-HS475F | AAGGCGAAAGAAGCAGTCTTA | 724 | [35] | |
PLAT-HS1198R | CATAGTCTGAAGTGGAGGAC | ||||
gltA | PLA-CSM136F | TTGCAAAAAGTAAGCGGAGC | 1459 | [35] | |
PLA-CS1359R | AACCACAGGCTTATGACAAC |