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Table 3 In silico characterization of trypsin-like serine peptidases identified in the midgut of Culex quinquefasciatus females fed on sugar

From: In-depth characterization of trypsin-like serine peptidases in the midgut of the sugar fed Culex quinquefasciatus

Uniprot accession number Protein name Target P prediction Signal P prediction TMHMM prediction N-Glycosylation prediction O-Glycosylation prediction Exon number Paralogues number Supercontig
B0WIS4 Trypsin 1 S (0.901) 23^24 (0.761) No 158-NETV (0.7243) 36-T (0.627995)/40-S (0.689668) 1 36 3.14
B0WE94 Trypsin 2 S (0.910) 18^19 (0.818) No No No 2 36 3.94
B0XCW2 Trypsin 4 S (0.973) 22^23 (0.935) inside: 1-6/Tmhelix:7-26/outside: 27-258 27-NGTQ (0.8040) No 2 36 3.91
B0X667 Trypsin 5 S (0.952) 17^18 (0.855) inside: 291-293/Tmhelix: 268-290/outside: 1-267 65-NRTV (0.6702)/183-NVTV (0.8306) 151-T (0.653105)/159-S (0.523482) 3 13 3.59
B0XES8 Trypsin 7 S (0.832) 21^22 (0.665) No 106-NVTF (0.6360) No 3 36 3.11
B0X870 SP24D S (0.891) 20^21 (0.801) No 69-NGSV (0.6998)/75-NLSV (0.6183) No 2 24 3.66
B0W9S9 Serine protease 1/2 S (0.960) 26^27 (0.750) No No 44-S (0.785129) 2 38 3.54
B0WW44 Cationic trypsin S (0.926) 20^21 (0.794) No No No 3 24 3.33
  1. TargetP 1.1 Server. Prediction of the subcellular location of trypsin. S = secreted. The number into the parenthesis indicates the probability
  2. SignalP 4.0 Server. Prediction of presence and location of signal peptide cleavage sites in the trypsin sequences. The numbers indicates the number of the amino acid residues involved in the cleavage. The number into the parenthesis indicates the probability
  3. TMHMM 2.0 Server. Prediction of transmembrane helices in proteins. Tmhelix: transmembrane helix
  4. NetNglyc 1.0 Server. Prediction of N-Glycosylation sites based on the presence of Asn-Xaa-Ser/Thr motifs. The number into the parenthesis indicates the probability
  5. NetOglyc 4.0 Server. Prediction of mucin type GalNAc O-glycosylation sites
  6. According to VectorBase database