Table 1 The most expressed genes in iron-deficient T. vaginalis
From: Nitric oxide maintains cell survival of Trichomonas vaginalis upon iron depletion
GeneID | TrichDB Annotation | RPKM (IR) | RPKM (ID) |
|---|---|---|---|
METABOLIC ENZYMES | |||
TVAG_171090 | Malate dehydrogenase, putative | 1171.96 | 19,482.82 |
TVAG_344880 | Alcohol dehydrogenase, putative | 115.8 | 3,902.75 |
TVAG_038440 | Fructose-bisphosphate aldolase, putative | 63.12 | 1,715.45 |
TVAG_196700 | Glutamate dehydrogenase, putative | 41 | 1,787.34 |
OXIDOREDUCTASES | |||
TVAG_167830 | Regulator of cell morphogenesis and NO signaling (RCMNS) (metal ion binding) | 237.68 | 2,776.24 |
TVAG_107080 | 4-carboxymuconolactone decarboxylase 2 | 11.21 | 3,030.84 |
TVAG_256720 | 4-carboxymuconolactone decarboxylase 1 | 2.82 | 3,363.03 |
TVAG_336320 | Hydroxylamine reductase, putative | 70.86 | 1089.89 |
PROTEOLYTIC PROCESSES | |||
TVAG_184150 | Ubiquitin, putative | 113.42 | 1563.65 |
TVAG_476160 | Clan MG, family M24, aminopeptidase P-like metallopeptidase | 77.07 | 1534.83 |
TVAG_386080 | Clan MG, family M24, aminopeptidase P-like metallopeptidase | 129.25 | 7169.21 |
OTHERS | |||
TVAG_469020 | Biotin synthase, putative | 4.15 | 1,508.21 |
TVAG_321740 | Conserved hypothetical protein | 67.62 | 8933.47 |
TVAG_059980 | Conserved hypothetical protein | 102.07 | 1,355.29 |
TVAG_307440 | Conserved hypothetical protein | 7.34 | 1,956.57 |
TVAG_491130 | Conserved hypothetical protein | 75.06 | 2,060.76 |
TVAG_488900 | Conserved hypothetical protein | 1.48 | 2,220.44 |