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Table 5 Locus-specific genotyping error rates estimated from mismatches between adult females or males and offspring with the program CERVUS3.07

From: Detecting genotyping errors at Schistosoma japonicum microsatellites with pedigree information

Locus

Detection probability

Mother-offspring pairs

Father-offspring pairs

No. genotypes compared

No. alleles mismatching

Estimated error rate

No. genotypes compared

No. alleles mismatching

Estimated error rate

sjp4

0.120

107

0

0

107

0

0

sjp18

0.332

107

0

0

107

0

0

sjp22

0.172

102

4

0.114

102

6

0.171

sjp42

0.300

103

3

0.049

76

0

0

sjp58

0.272

96

3

0.057

96

2

0.038

sjp60

0.492

105

3

0.029

105

3

0.029

TS2

0.169

95

3

0.093

95

4

0.124

  1. Detection probability, the average probability of exclusion of a single randomly-chosen unrelated individual from parentage when no information is available from the known parent. Estimated error rate, the ratio of the number of mismatches to the number compared scaled by the average probability of detecting a mismatch