Region | AT % | AT-skew | GC-skew | ||||||
---|---|---|---|---|---|---|---|---|---|
Pc | Pp | Lu | Pc | Pp | Lu | Pc | Pp | Lu | |
Whole genome | 79.2 | 77.5 | 78.6 | −0.014 | −0.012 | 0.003 | −0.248 | −0.239 | −0.209 |
Protein-coding genes | 76.4 | 75.1 | 76.5 | −0.167 | −0.150 | −0.125 | −0.006 | −0.016 | 0.036 |
First codon position | 70.0 | 68.6 | 70.4 | −0.088 | −0.066 | −0.060 | 0.225 | 0.209 | 0.265 |
Second codon position | 67.8 | 67.5 | 67.6 | −0.386 | −0.389 | −0.377 | −0.159 | −0.159 | −0.143 |
Third codon position | 91.3 | 89.0 | 91.4 | −0.072 | −0.039 | 0.008 | −0.237 | −0.241 | −0.081 |
tRNA genes | 80.8 | 79.8 | 79.4 | −0.003 | 0.043 | 0.030 | 0.161 | 0.116 | 0.079 |
rRNA genes | 84.3 | 83.4 | 84.1 | −0.005 | −0.012 | −0.015 | 0.364 | 0.354 | 0.385 |
A + T-rich region | 91.1 | 92.3 | 90.4 | −0.074 | −0.061 | 0.011 | −0.938 | −0.571 | −0.576 |