Sampling site | Number | COI type | wPip type | ACE2btype | CQ11 results c | References | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
pip | quin | hybrid | pip | mol/quin | hybrid | neg | |||||
Russia, Moscow region | 7 | A,B,C | II | 7 | - | - | 7 | - | - | - | This study |
Germany, Berlin | 9 | A,C | II | 9 | - | - | 9 | - | - | - | This study |
Germany, Hannover | 17 | A (B,C) | II | 17 | - | - | 17 | - | - | - | This study |
Russia, Volgograd | 12 | A (B,C) | II | 12 | - | - | 12 | - | - | - | This study |
France, Prades-le-Lez 1 | 16 | A (B,C) | II | 16 | - | - | 14 | - | 2 | - | This study |
France, Prades-le-Lez 2 | 22 | A (B,C) | II | 22 | - | - | 16 | 3 | 3 | - | This study |
France, Saint-Nazaire de Pezan | 12 | A (B,C) | II | 12 | - | - | 9 | - | 2 | 1 | This study |
T7 strain, France,Montpellier | 11 | A (B,C) | II | 11 | - | - | - | 8 | 1 | - | This study |
Morocco, Casablanca | 2 | A (B,C) | II | 2 | - | - | - | - | 2 | - | This study |
Russia, S-Peterburg1a | 8 | D | IV | 8 | - | - | - | 6 | 2 | - | This study |
Russia, S-Peterburg2a | 7 | D | IV | 7 | - | - | - | 3 | 4 | - | This study |
Russia, Tomska | 9 | D | IV | 9 | - | - | ND | ND | ND | ND | [35] |
Russia, Ekaterinburga | 6 | D | IV | 6 | - | - | ND | ND | ND | ND | [35] |
Russia, Moscowa | 20 | D | IV | 20 | - | - | - | 18 | 2 | - | This study |
Germany, Berlina | 4 | D | IV | 4 | - | - | - | 3 | 1 | - | This study |
Germany, Hannovera | 1 | D | IV | 1 | - | - | - | 1 | - | - | This study |
Russia, Volgograda | 8 | D | IV | 8 | - | - | - | 5 | 3 | - | This study |
Italy, Piedmont | 18 | D | IV | 18 | - | - | 9 | - | 3 | 6 | This study |
Tunisia, Nefza | 16 | D | IV | 16 | - | - | 7 | 4 | 2 | 3 | This study |
Tunisia, Tabarka | 12 | D | IV | 12 | - | - | 4 | 2 | 3 | 3 | This study |
Morocco, Casablanca | 1 | D | IV | 1 | - | - | - | - | 1 | - | This study |
Portugal, Comporta | 4 | E | I | 4 | - | - | 3 | 1 | - | - | This study and CQ11 from [20] |
Portugal, Comporta | 6 | E1 | I | 6 | - | - | 1 | 4 | 1 | - | |
Greece, Kos | 24 | E | I | 11 | - | 13 | 3 | 7 | 14 | - | This study and ACE2 and CQ11 from [13] |
Greece, Cyprus | 3 | E | ND | 3 | - | - | - | - | 2 | 1 | This study |
Morocco, Tanger | 13 | E | I | 6 | - | 7 | 3 | - | 10 | - | This study |
India, Pondisherry | 6 | E | I | - | 6 | - | ND | ND | ND | ND | This study |
Total | 274 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |