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Table 2 The mitochondrial genome of Aglaiogyrodactylus forficulatus; gene organization and gene order as determined by MITOS [8] and DOGMA [9]

From: The mitochondrial genome of the egg-laying flatworm Aglaiogyrodactylus forficulatus (Platyhelminthes: Monogenoidea)

Gene

Position

Length (bp)

Start/Stop codon of PCGs

Best-fit modelc

Cytb

1–1101

1101

ATG/TAG

GTR + G

ND4L

1109–1363

255

ATG/TAA

GTR + I + G

ND4

1306–2508

1203

ATT/TAG

 

tRNA Q

2504–2566

63

 

GTR + I + G

tRNA Ma

2568–2632

65

 

GTR + I + G

tRNA Fa

2651–2713

63

 

GTR + I + G

ATP6

2735–3250

516

ATG/TAA

GTR + I + G

ND2

3280–4104

825

ATT/TAG

GTR + I + G

tRNA S1

4193–4251

59

 

GTR + I + G

tRNA W

4252–4314

63

 

GTR + I + G

COI

4312–5841

1530

ATG/TAG

GTR + I + G

tRNA Ta

5842–5906

65

 

GTR + I + G

16S

5907–6834

928

 

GTR + I + G

tRNA C

6843–6901

59

 

GTR + I + G

12S

6887–7615

729

 

GTR + I + G

COII

7613–8188

576

ATG/TAG

GTR + I + G

tRNA E

8205–8270

66

 

GTR + I + G

ND6

8272–8742

471

ATG/TAA

GTR + I + G

tRNA Y

8746–8808

63

 

GTR + I + G

tRNA S2

8817–8873

57

 

GTR + I + G

Non–coding region I

8874–9358

485

  

Repeat region I

9017–9277

261

  

tRNA V

9359–9420

62

 

GTR + I + G

tRNA Da

9421–9482

62

 

GTR + I + G

Non–coding region II

9483–10216

733

  

Repeat region II

9539–10212

675

  

tRNA Aa

10217–10277

61

 

GTR + I + G

ND1

10282–11175

894

ATG/TAG

 

tRNA Na

11175–11237

63

 

GTR + I + G

tRNA Pb

11238–11301

64

 

GTR + I + G

tRNA I

11300–11362

63

 

GTR + I + G

tRNA Ka

11363–11423

61

 

GTR + I + G

ND3

11438–11800

363

ATG/TAG

GTR + G

tRNA L1a

11801–11865

65

 

GTR + I + G

tRNA R

11866–11931

66

 

GTR + I + G

tRNA L2

11932–11995

64

 

GTR + I + G

ND5

12038–13597

1560

ATG/TAA

GTR + I + G

tRNA G

13597–13658

62

 

GTR + I + G

COIII

13659–14304

645

ATG/TAA

GTR + I + G

tRNA H

14308–14369

63

 

GTR + I + G

  1. agenes confirmed by tRNAscan-SE [10]; btRNA P was only identified by MITOS [8]; cusing PartitionFinder v.1.1.1_Mac [29] with the program’s “raxml” search option and the Bayesian Information Criterion (BIC), all tRNAs were concatenated into one partition