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Table 2 The mitochondrial genome of Aglaiogyrodactylus forficulatus; gene organization and gene order as determined by MITOS [8] and DOGMA [9]

From: The mitochondrial genome of the egg-laying flatworm Aglaiogyrodactylus forficulatus (Platyhelminthes: Monogenoidea)

Gene Position Length (bp) Start/Stop codon of PCGs Best-fit modelc
Cytb 1–1101 1101 ATG/TAG GTR + G
ND4L 1109–1363 255 ATG/TAA GTR + I + G
ND4 1306–2508 1203 ATT/TAG  
tRNA Q 2504–2566 63   GTR + I + G
tRNA Ma 2568–2632 65   GTR + I + G
tRNA Fa 2651–2713 63   GTR + I + G
ATP6 2735–3250 516 ATG/TAA GTR + I + G
ND2 3280–4104 825 ATT/TAG GTR + I + G
tRNA S1 4193–4251 59   GTR + I + G
tRNA W 4252–4314 63   GTR + I + G
COI 4312–5841 1530 ATG/TAG GTR + I + G
tRNA Ta 5842–5906 65   GTR + I + G
16S 5907–6834 928   GTR + I + G
tRNA C 6843–6901 59   GTR + I + G
12S 6887–7615 729   GTR + I + G
COII 7613–8188 576 ATG/TAG GTR + I + G
tRNA E 8205–8270 66   GTR + I + G
ND6 8272–8742 471 ATG/TAA GTR + I + G
tRNA Y 8746–8808 63   GTR + I + G
tRNA S2 8817–8873 57   GTR + I + G
Non–coding region I 8874–9358 485   
Repeat region I 9017–9277 261   
tRNA V 9359–9420 62   GTR + I + G
tRNA Da 9421–9482 62   GTR + I + G
Non–coding region II 9483–10216 733   
Repeat region II 9539–10212 675   
tRNA Aa 10217–10277 61   GTR + I + G
ND1 10282–11175 894 ATG/TAG  
tRNA Na 11175–11237 63   GTR + I + G
tRNA Pb 11238–11301 64   GTR + I + G
tRNA I 11300–11362 63   GTR + I + G
tRNA Ka 11363–11423 61   GTR + I + G
ND3 11438–11800 363 ATG/TAG GTR + G
tRNA L1a 11801–11865 65   GTR + I + G
tRNA R 11866–11931 66   GTR + I + G
tRNA L2 11932–11995 64   GTR + I + G
ND5 12038–13597 1560 ATG/TAA GTR + I + G
tRNA G 13597–13658 62   GTR + I + G
COIII 13659–14304 645 ATG/TAA GTR + I + G
tRNA H 14308–14369 63   GTR + I + G
  1. agenes confirmed by tRNAscan-SE [10]; btRNA P was only identified by MITOS [8]; cusing PartitionFinder v.1.1.1_Mac [29] with the program’s “raxml” search option and the Bayesian Information Criterion (BIC), all tRNAs were concatenated into one partition