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Table 4 Pairwise distances (total character differences) between 16S sequences of haplotypes and isolates of Lymnaea neotropica and L. viator

From: Human fascioliasis endemic areas in Argentina: multigene characterisation of the lymnaeid vectors and climatic-environmental assessment of the transmission pattern

Haplotype codes and isolates

GenBank acc. no.

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

1. L. neotropica L.neo-16SA

HE610433

                    

2. L. neotropica L.neo-16SA

KT226115

0

                   

3. L. neotropica isolate NtS1

JN872471

8

8

                  

4. L. neotropica isolate NtS2

JN872472

1

1

9

                 

5. L. neotropica isolate NtS3

JN872473

0

0

8

1

                

6. L. neotropica isolate NtS4

JN872474

5

5

9

5

5

               

7. L. viator L.via-16SA

HE610434

5

5

13

6

5

10

              

8. L. viator L.via-16SB

KT215352

5

5

13

6

5

10

0

             

9. L. viator isolate VxS2

JN872460

5

5

13

6

5

10

0

0

            

10. L. viator isolate VxS9

JN872467

6

6

14

7

6

11

1

1

1

           

11. L. viator isolate VxS8

JN872466

4

4

12

5

4

9

1

1

1

2

          

12. L. viator isolate VxS10

JN872468

5

5

12

6

5

10

2

2

2

3

1

         

13. L. viator isolate VxS4

JN872462

7

7

11

8

7

12

2

2

2

3

3

4

        

14. L. viator isolate VxS12

JN872470

5

5

11

6

5

10

2

2

2

3

1

2

4

       

15. L. viator isolate VxS6

JN872464

10

10

12

11

10

11

5

5

5

4

6

7

7

7

      

16. L. viator isolate VxS5

JN872463

8

8

10

9

8

13

3

3

3

4

4

5

1

5

8

     

17. L. viator isolate VxS11

JN872469

9

9

11

10

9

8

6

6

6

7

5

6

8

6

3

9

    

18. L. viator isolate VxS3

JN872461

11

11

13

10

11

11

6

6

6

5

7

8

8

8

1

9

4

   

19. L. viator isolate VxS7

JN872465

9

9

12

10

9

14

4

4

4

5

5

4

2

6

9

3

10

10

  

20. L. viator isolate VxS1

JN872459

9

9

11

10

9

8

4

4

4

5

5

6

6

6

3

7

2

4

8

 
  1. Distances calculated in MEGA 6.0.6 using total number of differences, including transitions (ts) + transversions (tv); gaps treated as complete deletion. Haplotype codes are listed in Table 1