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Table 4 Variations in the tpi, gdh and bg nucleotide sequences among the genotypes of the Giardia intestinalis in raccoon dogs in Northern China

From: Occurrence and multilocus genotyping of Giardia intestinalis assemblage C and D in farmed raccoon dogs, Nyctereutes procyonoides, in China

Locus

Subtype (no.)

Nucleotide at position

GenBank accession no.

tpi

 

3

9

10

99

163

189

317

368

378

423

444

521

 
 

18–2 (1)

C

T

C

C

C

C

T

T

A

G

G

G

KX014795

 

WH10 (4)

T

T

C

C

C

C

T

T

C

G

G

G

KX014804

 

Z27 (1)

T

T

G

C

C

C

T

T

C

G

T

G

KX014803

 

A38 (2)

C

C

G

T

C

C

T

C

A

A

G

T

KX014798

 

Z31 (2)

C

C

G

C

C

C

T

C

A

A

G

T

KX014799

 

A6 (2)

C

C

G

T

C

C

T

C

A

A

G

G

KX014797

 

A22 (1)

C

T

C

T

C

C

T

T

A

A

G

G

KX014796

 

L24 (1)

C

C

G

T

C

C

T

T

A

G

G

G

KX014800

 

11–1 (1)

C

C

G

C

C

C

C

T

A

G

T

G

KX014801

 

L21 (1)

C

C

G

C

C

C

C

T

A

A

G

G

KX014802

 

L15 (4)

C

C

G

C

T

T

C

T

C

G

G

T

KX014793

 

L10 (1)

G

G

G

C

T

T

C

T

C

G

G

G

KX014794

 

A11 (1)

C

C

G

C

T

T

C

T

A

G

G

G

KX014805

gdh

 

22

112

115

126

151

494

       
 

18–2 (6)

C

C

A

T

G

C

      

KX014790

 

11–1 (4)

A

C

A

T

A

C

      

KX014791

 

A14 (1)

C

T

G

C

G

A

      

KX014792

bg

 

18

27

45

54

60

72

78

96

97

102

   
 

11–1 (11)

C

C

C

T

G

C

C

G

G

G

  

KX014788

 

Z27 (2)

T

T

T

A

T

T

G

A

A

C

  

KX014789