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Table 2 Nucleotide and/or deduced amino acid (aa) sequence differences of the protein-coding and two ribosomal RNA genes of the mt genomes of Cloacotaenia megalops (CM), Hymenolepis nana (HN), Hymenolepis diminuta (HD) and Pseudanoplocephala crawfordi (PC)

From: Characterization of the complete mitochondrial genome of the cloacal tapeworm Cloacotaenia megalops (Cestoda: Hymenolepididae)

Gene/region Nucleotide length (bp) Nucleotide difference (%) Number of aa aa difference (%)
CM HN HD PC CM vs HD CM vs HN CM vs PC HN vs HD HN vs PC HD vs PC CM HN HD PC CM vs HN CM vs HD CM vs PC HN vs HD HN vs PC HD vs PC
atp6 513 516 516 516 30.0 30.2 30.4 26.9 28.2 21.9 170 171 171 171 27.5 29.2 30.4 30.4 32.7 33.1
nad1 891 894 891 891 25.6 25.7 25.8 21.7 19.8 16.4 296 297 296 296 23.6 25.7 25.0 18.9 18.2 12.2
nad2 879 885 882 897 31.7 32.1 32.3 27.0 27.1 24.7 292 294 293 298 37.7 39.4 41.4 34.5 35.6 24.7
nad3 354 348 348 348 31.3 29.0 28.2 25.3 27.3 21.8 117 115 115 115 36.5 38.3 37.4 22.6 29.6 19.1
nad4 1254 1209 1230 1230 31.1 33.4 32.4 29.6 33.9 25.5 417 402 409 409 33.3 36.9 35.9 32.7 34.2 25.4
nad4L 261 261 261 261 27.6 26.4 27.6 20.7 20.3 16.1 86 86 86 86 30.2 32.6 29.1 20.9 21.9 19.8
nad5 1572 1575 1575 1575 31.7 35.3 34.2 31.2 31.7 25.9 523 524 524 524 33.3 38.6 34.1 35.4 36.6 26.1
nad6 450 459 459 459 34.0 33.6 32.7 32.2 30.3 24.6 149 152 152 152 42.3 43.2 43.6 39.1 39.7 24.3
cox1 1593 1584 1552 1582 23.2 23.4 22.4 20.6 19.4 17.3 530 527 517 527 15.9 18.6 16.7 16.3 16.2 10.6
cox2 579 573 579 579 26.3 27.7 26.9 26.4 28.3 18.3 192 190 192 192 21.9 26.8 24.5 26.3 28.4 13.0
cox3 654 645 651 651 32.0 31.7 30.7 29.8 30.1 20.5 217 214 216 216 41.6 42.5 38.3 34.6 31.3 26.4
cytb 1092 1098 1098 1095 25.3 23.8 25.4 23.0 23.4 20.3 363 365 365 364 22.9 20.9 23.8 17.3 20.9 15.7
rrnS 722 710 709 724 18.7 19.8 20.5 16.5 17.0 12.9
rrnL 959 967 967 963 23.3 20.7 24.0 21.8 23.2 19.2