Table 1 Sequencing, assembly and annotation of the transcriptomes of adult P. westermani and P. skrjabini
| Â | P. westermani | P. skrjabini |
|---|---|---|
Sequence data | ||
 Raw read pairs | 46,468,226 | 49,816,749 |
 Clean read pairs | 34,096,586 | 38,071,235 |
Raw transcript assembly | ||
 Unigenes | 54,488 | 90,091 |
 Transcripts | 71,317 | 126,745 |
Filtered transcript assembly | ||
 Unigenes | 21,586 | 25,825 |
 Transcripts | 27,842 | 35,312 |
 Mean unigene length (bp) | 813.0 ± 598.5 | 772.4 ± 570.0 |
 Mean transcript length (bp) | 853.9 ± 600.1 | 834.8 ± 595.9 |
 Fragmentation rate | 24.3 % | 26.7 % |
Predicted proteins | ||
 Unique protein translations | 26,431 | 32,706 |
 Unigenes | 21,585 | 25,822 |
 Transcripts | 27,838 | 35,305 |
 Mean protein length (aa) | 271.0 ± 199.5 | 257.5 ± 190.0 |
Annotation (functional terms / unigenes) | ||
 Unique InterPro domains | 4,190 / 8,853 | 3,263 / 7,152 |
 Unique GO terms | 1,197 / 6,964 | 1,024 / 5,460 |
 Unique KEGG orthologous groups | 3,618 / 13,257 | 3,605 / 12,168 |
 Unique KEGG pathways | 313 / 8,081 | 313 / 7,426 |
 Unique KEGG pathway modules | 218 / 3,189 | 220 / 2,897 |