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Table 1 Prevalence of G. duodenalis and assemblages determined by sequence analysis of the SSU rRNA, bg, gdh and tpi genes

From: Prevalence and multilocus genotyping of Giardia duodenalis in dairy calves in Xinjiang, Northwestern China

Farm

No. of samples

No. of positive for G. duodenalis (%) [95 % CI]

SSU rRNA gene (n)

bg (n)

gdh (n)

tpi (n)

WujiaquA

18

0

    

WujiaquB

31

1 (3.2) [0–7.6]

E (1)

 

E (1)

E (1)

WujiaquC

20

3 (15.0) [6.2–23.8]

E (2), A (1)

E (1), A (1)

A (1)

A (1)

Changji

33

1 (3.0) [0–7.2]

A (1)

  

A (1)

Urumqi

32

3 (9.4) [3.8–15.0]

E (3)

E (1)

E (1)

 

KorlaA

11

1 (9.1) [0–21.5]

E (1)

   

KorlaB

13

1 (7.7) [0–18.3]

E (1)

   

KorlaC

32

2 (6.3) [1.2–11.4]

E (1), A(1)

A (1)

E (1), A (1)

E (1), A (1)

KorlaD

33

2 (6.1) [1.1–11.1]

E (1), A(1)

   

Tacheng

8

0

    

Zhaosu

8

1 (12.5) [0–29.5]

A (1)

 

A (1)

A (1)

AksuA

48

9 (18.8) [14.0–23.6]

E (9)

E (8)

E (7)

E (6)

AksuB

58

7 (12.1) [8.3–15.9]

E (7)

E (2)

E (3)

E (2)

AksuC

70

17 (24.3) [20.5–28.1]

E (17)

E (8)

E (12)

E (11)

AksuD

99

21 (21.2) [18.3–24.1]

E (21)

E (7)

E (9)

E (7), A (1)

Total

514

69 (13.4) [12.6–14.2]

E (64), A (5)

E (27), A (2)

E (34), A (3)

E (28), A (5)

  1. Abbreviations: CI 95 % confidence interval, A assemblage A, E assemblage E