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Table 2 Relationship of R. raoultii strain Jongejan with available NCBI sequences

From: Novel Rickettsia raoultii strain isolated and propagated from Austrian Dermacentor reticulatus ticks

Target

Accession no.

Size (bp)

Identity (%)a

Closest related R. raoultii sequence

16S ribosomal RNA

KX500096

252

99

KJ410261.1

23S-5S ribosomal RNA intergenic spacer

KX500097

157

100b

CP010969.1

sca4

KX500095

802

100c

DQ365807.1

ompA

KX500093

513

100

AH009131.2

ompB

KX500094

710

100

KU310593.1

gltA

KX500092

259

100

KU310589.1

  1. aIdentity according to NCBI BLAST (blast.ncbi.nlm.nih.gov) analysis
  2. bContains a 60 base-pair deletion when compared with the reference genome (CP010969.1)
  3. cSingle nucleotide insertion results into a pseudogene