Table 1 Rhipicephalus spp. ticks analysed. Individuals with the same Genbank accession number share the same haplotype
Species | Code | Geographical origin | Intron | 5′ splice donor | Intron size (bp) | 3′ splice donor | GenBank accession number |
|---|---|---|---|---|---|---|---|
R. sanguineus a | – | Colombia | yes | GGAG/gtgagta | 341 | gtgcag/ATGC | AY395275 |
Tropical lineage | tick224 | Vietnam (Ho Chi Minh City) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951737 |
| Â | tick228 | Thailand (Bangkok) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951737 |
| Â | tick230 | Thailand (Bangkok) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951738 |
| Â | tick249 | Honduras (San Pedro) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951746 |
| Â | tick250 | Honduras (San Pedro) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951737 |
| Â | tick259 | Costa Rica (San Jose) | yes | GGAG/gtgagta | 340 | gtgcag/ATGC | KX951746 |
| Â | tick260 | Costa Rica (San Jose) | yes | GGAG/gtgagta | 340 | gtgcag/ATGC | KX951746 |
Rhipicephalus sp. I | tick129 | Italy (Putignano) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
|  | tick130 | Italy (Putignano) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
|  | tick131 | Italy (Putignano) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
|  | tick137 | Italy (Putignano) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
| Â | tick68 | Greece (Xanthi) | yes | GGAG/gtgagta | 339 | gtgcag/ATGC | KX951747 |
|  | tick68 | Greece (Xanthi) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
| Â | tick73 | Greece (Xanthi) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951739 |
|  | tick269 | Greece (Xanthi) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
|  | tick270 | Greece (Xanthi) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
|  | tick274 | Greece (Xanthi) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
|  | tick278 | Greece (Xanthi) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
Temperate lineage | tick28 | Spain (La Vera, Santa Cruz de Tenerife) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951740 |
| Â | tick32 | Spain (La Vera, Santa Cruz de Tenerife) | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951740 |
| Â | tick216 | Portugal | yes | GGAG/gtgagta | 338 | gtgcag/ATGC | KX951741 |
|  | tick210 | Italy (Messina) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
|  | tick211 | Italy (Messina) | no | GGAG/gtgagta | – | gtgcag/ATGC | KX951751 |
Rhipicephalus sp. III | tick196 | Pakistan (Punjab) | yes | GGAG/gtgagta | 338 | gcgcag/ATGC | KX951742 |
Rhipicephalus sp. IV | tick144 | Nigeria (Plateau State) | yes | GGAG/gtgagta | 336 | gtgcag/ATGC | KX951748 |
| Â | tick 145 | Nigeria (Plateau State) | yes | GGAG/gtgagta | 336 | gtgcag/ATGC | KX951748 |
R. turanicus | tick153 | Italy (Accettura) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951743 |
| Â | tick154 | Italy (Accettura) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951743 |
| Â | tick155 | Italy (Accettura) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951744 |
| Â | tick156 | Italy (Accettura) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951745 |
| Â | tick157 | Italy (Accettura) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951744 |
R. guilhoni | tick140 | Nigeria (Plateau State) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951750 |
| Â | tick141 | Nigeria (Plateau State) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951750 |
| Â | tick142 | Nigeria (Plateau State) | yes | GGAG/gtgagta | 335 | gtgcag/ATGC | KX951750 |
R. muhsamae | tick148 | Nigeria (Plateau State) | yes | GGAG/gtgagta | 332 | gtgcag/ATGC | KX951749 |