H. erinacei subspecies | Country | Location | Origin | cox1 sequence similarity with (*) | cox1 sequence ID (isolate, n = number > 1) | 16S sequence similarity with (*) | 16S sequence ID (isolate) |
---|---|---|---|---|---|---|---|
H. e. turanica | China | Alataw Pass | Vormela peregusna | 605/636 bp (95.1%) | KU880621 (ABL1) | 355/374 bp (94.9%) | KU880549 (ABL1) |
Alataw Pass | 605/636 bp (95.1%) | KU880609 (ABL6) | – | – | |||
Alataw Pass | 603/636 bp (94.8%) | KU880620 (ABL5-3) | – | – | |||
Alataw Pass | 603/636 bp (94.8%) | KU880608 (ABL5-1) | – | – | |||
Alataw Pass | 604/636 bp (95.0%) | KU880607 (ABL2) | 383/406 bp (94.3%) | KU880556 (ABL2) | |||
Alataw Pass | 604/636 bp (95.0%) | KU880559 (ABL5) | – | – | |||
Alataw Pass | 577/608 bp (94.9%) | KU880616 (ABL5-2) | – | – | |||
Alataw Pass | 575/608 bp (94.6%) | KU880615 (ABL4) | 352/374 bp (94.1%) | KU880550 (ABL4) | |||
Alataw Pass | 605/636 bp (95.1%) | KU880589 (ALSK186-1) | – | – | |||
Alataw Pass | 604/636 bp (95.0%) | KU880573 (ALSK186) | 351/374 bp (93.9%) | KU880551 (ALSK186) | |||
Alataw Pass | 603/636 bp (94.8%) | KU880572 (ALSK185) | – | – | |||
Alataw Pass | – | – | 384/405 bp (94.8%) | KU880555 (ABL1-1) | |||
Alataw Pass | – | – | 386/405 bp (95.3%) | KU880557 (ABL10) | |||
Alashankou | – | – | 356/384 bp (92.7%) | KR053302 (1) | |||
Alashankou | – | – | 361/382 bp (94.5%) | KR053303 (2) | |||
Alashankou | – | – | 362/382 bp (94.8%) | KR053304 (3) | |||
Alashankou | – | – | 361/383 bp (94.3%) | KR053305 (4) | |||
H. e. taurica* | Romania | Canaraua Fetii | cave entrance | 636/636 bp (100%) | KU885986 | 404/404 (100%) | KU885987 |
H. e. taurica | Turkey | Tokat Province | Homo sapiens | 636/636 bp | KX901844 (n = 2) | 401/404 bp (99.3%) | KX901845 |
Sivas Province | Erinaceus concolor | not successful | – (n = 2) | 391/406 bp (96.3%) | KX901846 | ||
H. e. erinacei | Italy | Basilicata region | Martes foina | 632/636 bp (99.4%) | KX237631 (n = 3) | 397/404 bp (98.3%) | KX237632 |
632/636 bp (99.4%) | KX237631 | 397/405 bp (98.0%) | KX237633 |