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Table 1 SLC11A1 polymorphisms

From: SLC11A1 polymorphisms and host susceptibility to cutaneous leishmaniasis in Pakistan

Genetic variation

Location

SNP identity

Nucleotide changea

Amino acid change

Observed allelesb

274C/T

Exon 3

rs2276631

TTC → TTT

Phe → Phe

C/T

577–18G/A

Intron 5

rs3731864

G → A

G

639 + 22C/T

Intron 7

rs2290708

C → T

C/T

825A/G

Exon 9

rs2695342

GCA → GCG

Ala → Ala

G

A318V

Exon 9

rs201565523

GCG → GTG

Ala → Val

C

V443A

Exon 13

rs17215556

GTG → GCG

Val → Ala

T/C

D543N

Exon 15

rs17235409

GAC → AAC

Asp → Asn

G/A

1729 + 55del4

3′UTR

rs17235416

TGTG deletion

[+/−]c

  1. aCharacters in bold indicate the nucleotide change reported. SNP identity retrieved from dbSNP Short Genetic Variations
  2. bAlleles identified in the sample population
  3. c + = insertion of TGTG; − = deletion of TGTG