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Table 1 SLC11A1 polymorphisms

From: SLC11A1 polymorphisms and host susceptibility to cutaneous leishmaniasis in Pakistan

Genetic variation Location SNP identity Nucleotide changea Amino acid change Observed allelesb
274C/T Exon 3 rs2276631 TTC → TTT Phe → Phe C/T
577–18G/A Intron 5 rs3731864 G → A G
639 + 22C/T Intron 7 rs2290708 C → T C/T
825A/G Exon 9 rs2695342 GCA → GCG Ala → Ala G
A318V Exon 9 rs201565523 GCG → GTG Ala → Val C
V443A Exon 13 rs17215556 GTG → GCG Val → Ala T/C
D543N Exon 15 rs17235409 GAC → AAC Asp → Asn G/A
1729 + 55del4 3′UTR rs17235416 TGTG deletion [+/−]c
  1. aCharacters in bold indicate the nucleotide change reported. SNP identity retrieved from dbSNP Short Genetic Variations
  2. bAlleles identified in the sample population
  3. c + = insertion of TGTG; − = deletion of TGTG