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Table 2 Primer sequences and nested PCR conditions for detection of rickettsial target genes from ticks collected from four southwestern provinces of Chungcheongnam, Chungcheongbuk, Jeollanam, and Jeollabuk in the Republic of Korea

From: Molecular detection of Rickettsia species in ticks collected from the southwestern provinces of the Republic of Korea

Target gene

Primer name

Nucleotide sequence (5'–3')

Product size (bp)

PCR profile (°C/s)

Reference

Denaturation

Annealing

Extension

Cycles

17 kDa

Rr17k. 1p

TTTACAAAATTCTAAAAACCAT

539

95/30

57/60

72/120

35

[23]

Rr17k. 539n

TCAATTCACAACTTGCCATT

Rr17k. 90p

GCTCTTGCAACTTCTATGTT

450

95/30

57/60

72/120

35

Rr17k. 539n

TCAATTCACAACTTGCCATT

ompA

Rr190k. 71p

TGGCGAATATTTCTCCAAAA

650

95/30

42/35

60/120

35

[23]

Rr190k. 720n

TGCATTTGTATTACCTATTGT

Rr190k. 71p

TGGCGAATATTTCTCCAAAA

532

95/30

48/60

65/120

35

Rr190k. 602n

AGTGCAGCATTCGCTCCCCCT