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Table 5 Candidate genes related to IVM resistance, identified within CDS regions that exhibit significantly elevated FST value

From: Genome-wide SNP analysis using 2b-RAD sequencing identifies the candidate genes putatively associated with resistance to ivermectin in Haemonchus contortus

Scaffold

BPa

Gene ID

Annotation

Scaffold_148

58,650

 cds:HCOI00506600.t3

Low density lipoprotein-receptor domain containing protein

Scaffold_148

65,574

 cds:HCOI00506600.t3

Low density lipoprotein-receptor domain containing protein

Scaffold_1483

47,819

 cds:HCOI00378500.t1

4Fe-4S ferredoxin and ABC transporter domain containing protein

Scaffold_340

169,069

 cds:HCOI01315600.t1

RNA polymerase-associated protein RTF1

Scaffold_3511

5425

 cds:HCOI01200700.t1

L27-1 and PDZ and Src homology-3 and guanylate kinase domain containing protein

Scaffold_4362

13,965

 cds:HCOI00703000.t1

AIR synthase related protein domain containing protein

Scaffold_774

42,481

 cds:HCOI02035600.t2

WW Rsp5 WWP and FF domain containing protein

Scaffold_793

2897

 cds:HCOI02054500.t1

Neurotransmitter-gatedion-channel ligand-binding

  1. aBase position of SNP loci located in a given scaffold
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ISSN: 1756-3305

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