From: Identification of microRNAs expressed in the midgut of Aedes albopictus during dengue infection
Provisional name | Sequence | Length | Supercontig | Start | End | Strand | Mfe |
---|---|---|---|---|---|---|---|
aal-mir-new1-5p | ACGCGGTCGTGCAGGAAATTATT | 23 | 1.1 | 2,315,096 | 2,315,175 | + | −39.1 |
aal-mir-new2-5p | TTTTGACACTAGAGCGGGGCC | 21 | 1.103 | 2,525,153 | 2,525,242 | - | −43.54 |
aal-mir-new3-3p | TGTTGGAACAGGAGCGGTGACTGG | 24 | 1.1048 | 247,401 | 247,496 | + | −27.2 |
aal-mir-new4-3p | ACGTGATCTCCCAGCTGGATT | 21 | 1.104 | 2,576,089 | 2,576,167 | + | −66.6 |
aal-mir-new4-5p | TCCAGCTGGGAGATCACGTAC | 21 | 1.104 | 2,576,089 | 2,576,167 | + | −66.6 |
aal-mir-new5-3p | TGAATAAGTGCGGTGAAGACA | 21 | 1.1056 | 241,944 | 242,019 | - | −48.4 |
aal-mir-new6-5p | TTGAAGGAATCCCTGGAGGCA | 21 | 1.112 | 2,058,675 | 2,058,759 | - | −32.1 |
aal-mir-new7-3p | TGGGGTTGGGCGGAAGGGTTG | 21 | 1.1156 | 159,517 | 159,603 | + | −29.8 |
aal-mir-new8-5p | ATTCGCACAACAGTCCCATGTT | 22 | 1.125 | 2,091,162 | 2,091,244 | + | −28.1 |
aal-mir-new9-3p | AGAATAAAGACTGCGTAGCCA | 21 | 1.127 | 946,697 | 946,773 | - | −27.7 |
aal-mir-new10-5p | TTGGCCATTTTGGAACCGGTA | 21 | 1.13 | 1,968,890 | 1,968,963 | - | −29.7 |
aal-mir-new11-5p | TTAAACATAACGTCGGAAGTA | 21 | 1.134 | 1,382,610 | 1,382,700 | - | −47.7 |
aal-mir-new12-5p | TCTGGAGCAACATTTGAAAAG | 21 | 1.163 | 418,620 | 418,704 | + | −24.54 |
aal-mir-new13-5p | GAATTTTGACATTAGAGCGGG | 21 | 1.1642 | 60,969 | 61,064 | + | −59.1 |
aal-mir-new14-5p | AGAATTTTGACACTAGAGCAG | 21 | 1.194 | 1,043,569 | 1,043,645 | - | −32.6 |
aal-mir-new15-5p | TGAAGGAATCCCTGGAGGCAT | 21 | 1.2 | 2,052,582 | 2,052,676 | - | −32.1 |
aal-mir-new16-3p | ATTTTTTTGACTGTAATTTTAT | 22 | 1.245 | 1,560,997 | 1,561,095 | - | −26.61 |
aal-mir-new17-5p | GGGAGCGAGATTAAGGCTTGCT | 22 | 1.249 | 1,089,011 | 1,089,093 | - | −29.81 |
aal-mir-new18-3p | ATCCCAAGACTGCGTAGCCGT | 21 | 1.292 | 1,163,558 | 1,163,655 | + | −42.4 |
aal-mir-new19-5p | CGAATTTTGACACTAGAGCGG | 21 | 1.299 | 707,787 | 707,872 | - | −29.5 |
aal-mir-new20-3p | GTCCCTCTGGCGCAGCGGATAGCG | 24 | 1.32 | 579,217 | 579,298 | - | −37.5 |
aal-mir-new21-3p | TAAGTGCGCTGAAGACATCA | 20 | 1.379 | 448,733 | 448,811 | + | −51.82 |
aal-mir-new22-5p | AACGGTCTAGGGTTCATGTCC | 21 | 1.389 | 711,000 | 711,091 | + | −30.4 |
aal-mir-new23-5p | AAATTTTGACACTAGAGCGGG | 21 | 1.412 | 335,537 | 335,632 | - | −48.1 |
aal-mir-new24-3p | ACGATGAGGATGATGATGGTG | 21 | 1.457 | 821,927 | 822,021 | + | −31.16 |
aal-mir-new25-5p | GGGGGAAATCCTGTACGCTGTATG | 24 | 1.51 | 2,008,649 | 2,008,731 | + | −33.4 |
aal-mir-new26-5p | TTGGCATAAGGACGTTTGGCA | 21 | 1.526 | 450,600 | 450,680 | + | −26.7 |
aal-mir-new27-5p | GAATTTTGACACTAGAGCAGG | 21 | 1.57 | 59,966 | 60,061 | + | −44.2 |
aal-mir-new28-3p | CTGAAGAACTTTGCCGAAGAC | 21 | 1.576 | 275,303 | 275,389 | + | −30.6 |
aal-mir-new29-5p | ATTAGAATGTGGAATCTGTTTT | 22 | 1.62 | 576,218 | 576,309 | - | −32.2 |
aal-mir-new30-5p | TGGGTATTTTCGGAACGGGCT | 21 | 1.64 | 1,822,262 | 1,822,351 | - | −28.7 |
aal-mir-new31-3p | CGGAATTCCAACTGATATCCA | 21 | 1.68 | 2,729,339 | 2,729,428 | - | −35.25 |
aal-mir-new32-5p | CAATTTTGACACTAGAGCGGG | 21 | 1.784 | 432,120 | 432,215 | - | −50.9 |
aal-mir-new33-5p | GGGAGCGAGATTAAGGCTTG | 20 | 1.249 | 1,089,011 | 1,089,093 | - | −29.81 |
aal-mir-3960-5p | GGCGGCGGCGGAGGTGGAGGT | 21 | 1.506 | 579,623 | 579,702 | + | −53.3 |