The ribosomal transcription units of Haplorchis pumilio and H. taichui and the use of 28S rDNA sequences for phylogenetic identification of common heterophyids in Vietnam

Table 3 Summary data for the 28S rDNA sequences for heterophyids and other trematodes available on GenBank and used in the phylogenetic analysis and species identification

Family	Country	Species	GenBank no.	Reference
Heterophyidae	Thailand	Centrocestus formosanus ^a	HQ874609	GenBank
	Germany	Cryptocotyle lingua	AY222228	[18]
	Japan	Euryhelmis costaricensis	AB521797	[32]
	Japan	Euryhelmis costaricensis	AB521799	[32]
	Thailand	Haplorchis pumilio ^a	HM004186	[10]
	Thailand	Haplorchis taichui ^a	HM004181	[18]
	Thailand	Haplorchis yokogawai ^a	HM004178	[10]
	Australia	Haplorchoides sp.	AY222226	[15]
	Japan	Metagonimus hakubaensis	KM061388	[31]
	Japan	Metagonimus hakubaensis	KM061389	[31]
	Japan	Metagonimus katsuradai	KM061391	[31]
	Japan	Metagonimus otsurui	KM061394	[31]
	Japan	Metagonimus takahashii	HQ832636	[18]
	Japan	Metagonimus yokogawai	HQ832639	[18]
	Thailand	Procerovum varium ^a	HM004182	[18]
	Vietnam	Stellantchasmus falcatus ^a	HM004174	[18]
	Vietnam	Stellantchasmus falcatus ^a	HM004176	[10]
Cryptogonimidae	Sri Lanka	Acanthostomum sp.	KC489792	GenBank
	New Caledonia	Adlardia novaecaledoniae	FJ788496	GenBank
	USA	Caecincola parvulus	AY222231	[15]
	Australia	Mitotrema anthostomatum	AY222229	[15]
Opisthorchiidae	Vietnam	Clonorchis sinensis	JF823989	[18]
	Vietnam	Opisthorchis viverrini	KY369165	This study
	Thailand	Opisthorchis viverrini	HM004188	[10]
	Thailand	Opisthorchis viverrini	JF823990	[18]
Diplostomidae	Ukraine	Alaria alata ^b	AF184263	[15]

^aPublished sequences for C. formosanus, H. pumilio, H. taichui, H. yokogawai, P. varium and S. falcatus and used in comparisons with those of the Vietnamese heterophyids
^bSequence used as the outgroup

ISSN: 1756-3305