Gene/region | Position (5'–3') | Repeat | Size (bp) | Intergenic spacer (bp) | Note |
---|---|---|---|---|---|
H. pumilio | GenBank: KX815125 | ||||
18S | 1–1992 | 1,992 | 0 | ||
ITS1 | 1993–3098 | 1,106 | +66 | 66 bp to TRA1 | |
2059–2194 | TRA1 | 136 | 0 | Tandem | |
2195–2330 | TRA2 | 136 | 0 | Tandem | |
2331–2466 | TRA3 | 136 | -91 | Overlap with TRB1 | |
2376–2498 | TRB1 | 123 | 0 | Tandem | |
2499–2621 | TRB2 | 123 | 0 | Tandem | |
2622–2705 | TRB3 (partial) | 84 | +393 | 393 bp to 5.8S | |
5.8S | 3099–3258 | 160 | 0 | ||
ITS2 | 3259–3546 | 288 | 0 | No repeats | |
28S | 3547–4943 | 1,397 | 5' partial sequence | ||
H. taichui | GenBank: KX815126 | ||||
18S | 1–1992 | 1,992 | 0 | ||
ITS1 | 1993–2779 | 797 | 0 | No repeats | |
5.8S | 2790–2949 | 160 | 0 | ||
ITS2 | 2950–3393 | 444 | +121 | 121 bp to TR1 | |
3071–3155 | TR1 | 85 | 0 | Tandem | |
3156–3238 | TR2 | 83 | 0 | Tandem | |
3239–3323 | TR3 | 85 | +70 | Tandem | |
28S | 3394–4796 | 1,403 | 5' partial sequence |